miRNEST 2.0, an integrative microRNA resource :: BLAST
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgcaa 36
||||||||||||||||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacagatgatgatatgcaa 47
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 138 tttgtgctctctatgcttctgtca 161
||||||||||||||||||||||||
Sbjct: 68 tttgtgctctctatgcttctgtca 91
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgca 35
|||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatgatatgca 35
Score = 52.0 bits (26), Expect = 1e-07
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 124 tgcatttcactccatttgtgctctctatgcttctgtca 161
||||| ||||||| ||||||||||||||||||||||||
Sbjct: 45 tgcatctcactcc-tttgtgctctctatgcttctgtca 81
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgca 35
|||||||||||||||||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcacagatgatgatatgca 41
Score = 52.0 bits (26), Expect = 1e-07
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 124 tgcatttcactccatttgtgctctctatgcttctgtca 161
||||| ||||||| ||||||||||||||||||||||||
Sbjct: 131 tgcatatcactcc-tttgtgctctctatgcttctgtca 167
>40428_gma-MIR156d:mirbase
Length = 151
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgca 35
|||||||||||||||||||||||||||||||||||
Sbjct: 22 tgacagaagatagagagcacagatgatgatatgca 56
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 138 tttgtgctctctatgcttctgtca 161
|||||||||||||| |||||||||
Sbjct: 108 tttgtgctctctatacttctgtca 131
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgcaa 36
||||||||||||||||||||||||||||| ||||||
Sbjct: 12 tgacagaagatagagagcacagatgatgaaatgcaa 47
Score = 42.1 bits (21), Expect = 1e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 125 gcatttcactccatttgtgctctctatgcttctgtca 161
|||| ||||||| |||||||||||||| |||||||||
Sbjct: 55 gcatctcactcc-tttgtgctctctattcttctgtca 90
>40337_rco-MIR156h:mirbase
Length = 97
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgcaa 36
|||||||||||||||||||||||||||||| |||||
Sbjct: 7 tgacagaagatagagagcacagatgatgatgtgcaa 42
Score = 52.0 bits (26), Expect = 1e-07
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 124 tgcatttcactccatttgtgctctctatgcttctgtca 161
||||| ||||||| ||||||||||||||||||||||||
Sbjct: 53 tgcatctcactcc-tttgtgctctctatgcttctgtca 89
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgca 35
|||||||||||||||||||||||||||||| ||||
Sbjct: 12 tgacagaagatagagagcacagatgatgatgtgca 46
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgca 35
||||||||||||||||||||||||||||| |||||
Sbjct: 12 tgacagaagatagagagcacagatgatgaaatgca 46
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgca 35
||||||||||||||||||||||||||||| |||||
Sbjct: 22 tgacagaagatagagagcacagatgatgagatgca 56
Score = 52.0 bits (26), Expect = 1e-07
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 124 tgcatttcactccatttgtgctctctatgcttctgtca 161
||||||||||||| |||||||||||||| |||||||||
Sbjct: 64 tgcatttcactcc-tttgtgctctctattcttctgtca 100
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgca 35
||||||||||||||||||||||||||||| |||||
Sbjct: 7 tgacagaagatagagagcacagatgatgaaatgca 41
>40010_ath-MIR157a:mirbase
Length = 98
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatga 29
|||||||||||||||||||||||||||||
Sbjct: 5 tgacagaagatagagagcacagatgatga 33
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatg 28
||||||||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacagatgatg 39
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 138 tttgtgctctctatgcttctg 158
|||||||||||||||||||||
Sbjct: 68 tttgtgctctctatgcttctg 88
>41077_gra-MIR157b:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatg 28
||||||||||||||||||||||||||||
Sbjct: 6 tgacagaagatagagagcacagatgatg 33
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 138 tttgtgctctctatgcttctgtca 161
||||||||||||||||||||||||
Sbjct: 63 tttgtgctctctatgcttctgtca 86
>41076_gra-MIR157a:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatg 28
||||||||||||||||||||||||||||
Sbjct: 6 tgacagaagatagagagcacagatgatg 33
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 138 tttgtgctctctatgcttctgtca 161
|||||||||| |||||||||||||
Sbjct: 73 tttgtgctctttatgcttctgtca 96
>40429_gma-MIR156e:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgca 35
|||||||||||||||||||| |||||||| |||||
Sbjct: 22 tgacagaagatagagagcactgatgatgaaatgca 56
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgca 35
||||||||||||||||||||| | |||||||||||
Sbjct: 24 tgacagaagatagagagcacaaaagatgatatgca 58
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 138 tttgtgctctctatgcttctgtca 161
||||||||||||| ||||||||||
Sbjct: 89 tttgtgctctctaagcttctgtca 112
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgca 35
||||||||||||||||||||| | |||||||||||
Sbjct: 24 tgacagaagatagagagcacaaaagatgatatgca 58
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 138 tttgtgctctctatgcttctgtca 161
||||||||||||| ||||||||||
Sbjct: 89 tttgtgctctctaagcttctgtca 112
>40011_ath-MIR157b:mirbase
Length = 132
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgat 27
|||||||||||||||||||||||||||
Sbjct: 20 tgacagaagatagagagcacagatgat 46
>39798_aly-MIR157a:mirbase
Length = 123
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgat 27
|||||||||||||||||||||||||||
Sbjct: 17 tgacagaagatagagagcacagatgat 43
>41525_sly-MIR156a:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgc 34
|||||||||||||||||||| ||||||||||||
Sbjct: 2 tgacagaagatagagagcactaatgatgatatgc 35
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 136 catttgtgctctctatgcttctgtca 161
||||||||||||||||||||||||||
Sbjct: 74 catttgtgctctctatgcttctgtca 99
>41162_aqc-MIR156a:mirbase
Length = 81
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatga 26
||||||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatga 26
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 138 tttgtgctctctatgcttctgtca 161
||||||||||||||||||||||||
Sbjct: 56 tttgtgctctctatgcttctgtca 79
>39801_aly-MIR157d:mirbase
Length = 256
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgcaaaa 38
|||||||||||||||||||| | ||||||||||||||
Sbjct: 38 tgacagaagatagagagcactaaggatgatatgcaaaa 75
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 140 tgtgctctctatgcttctgtca 161
||||||||||||||||||||||
Sbjct: 190 tgtgctctctatgcttctgtca 211
>39799_aly-MIR157b:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatga 26
||||||||||||||||||||||||||
Sbjct: 5 tgacagaagatagagagcacagatga 30
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 138 tttgtgctctctatgcttctgtca 161
||||||||||||| ||||||||||
Sbjct: 70 tttgtgctctctaagcttctgtca 93
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgca 35
|||||||||||||||||||| || ||||| |||||
Sbjct: 12 tgacagaagatagagagcactgacgatgaaatgca 46
>40431_gma-MIR156g:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgat 27
|||||||||||||||||||||| ||||
Sbjct: 25 tgacagaagatagagagcacaggtgat 51
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 106 tgacagaagatagagagcaca 86
>40336_rco-MIR156g:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgca 35
|||||||||||||||||||| || ||||| |||||
Sbjct: 7 tgacagaagatagagagcactgacgatgaaatgca 41
>39727_smo-MIR156b:mirbase
Length = 112
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacaga 23
|||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacaga 34
>40013_ath-MIR157d:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgatatgcaaaa 38
|||||||||||||||||||| | |||| |||||||||
Sbjct: 24 tgacagaagatagagagcactaaggatgctatgcaaaa 61
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 140 tgtgctctctatgcttctgtca 161
||||||||||||||||||||||
Sbjct: 172 tgtgctctctatgcttctgtca 193
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcaca 32
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 22 tgacagaagatagagagcaca 42
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcaca 27
>40427_gma-MIR156c:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 147 tgacagaagatagagagcaca 167
>40335_rco-MIR156f:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcaca 27
>39416_pta-MIR156b:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
>39415_pta-MIR156a:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
>41527_sly-MIR156c:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>41526_sly-MIR156b:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>40310_bra-MIR157a:mirbase
Length = 149
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 15 tgacagaagatagagagcac 34
>40304_bol-MIR157a:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcac 26
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 138 tttgtgctctctatgcttctgtca 161
|||||||||||||| |||||||||
Sbjct: 78 tttgtgctctctatacttctgtca 101
>40260_bna-MIR156c:mirbase
Length = 155
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 19 tgacagaagatagagagcac 38
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 138 tttgtgctctctatgcttctgtca 161
|||||||||||||| |||||||||
Sbjct: 114 tttgtgctctctatacttctgtca 137
>40259_bna-MIR156b:mirbase
Length = 208
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 26 tgacagaagatagagagcac 45
>40012_ath-MIR157c:mirbase
Length = 217
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 25 tgacagaagatagagagcac 44
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 138 tttgtgctctctatgcttctgtca 161
|||||||||||||| |||||||||
Sbjct: 165 tttgtgctctctatacttctgtca 188
>39800_aly-MIR157c:mirbase
Length = 293
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 56 tgacagaagatagagagcac 75
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 138 tttgtgctctctatgcttctgtca 161
|||||||||||||| |||||||||
Sbjct: 216 tttgtgctctctatacttctgtca 239
