miRNEST 2.0, an integrative microRNA resource :: BLAST
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 291 bits (147), Expect = 8e-80
Identities = 161/168 (95%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 70
Query: 61 atcccacagccctatcaccatcagtcattttgatgggcctgcggcttgcatatctcagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 atcccacagccctatcaccatcagtcattttgatgggcctgcggcttgcatatctcagga 130
Query: 121 gctttattacctaatgttagatcnnnnnnnggattgaagggagctcta 168
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 131 gctttattacctaatgttagatctttttttggattgaagggagctcta 178
>40338_rco-MIR159:mirbase
Length = 180
Score = 101 bits (51), Expect = 2e-22
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 60
|||||||||||||||||||||||| | || || ||||||||| ||||||||||||||||
Sbjct: 4 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 63
Query: 61 atcccacagccctat 75
|||||||||||||||
Sbjct: 64 atcccacagccctat 78
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 87.7 bits (44), Expect = 2e-18
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 60
|||||||||||||||||||||||| | || | |||||||||| |||||||||| ||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
Query: 61 atcccacagccctatc 76
||||||||||||||||
Sbjct: 69 atcccacagccctatc 84
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 87.7 bits (44), Expect = 2e-18
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 100 tgcggcttgcatatctcaggagctttattacctaatgttagatcnnnnnnnggattgaag 159
||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 106 tgcggcttgcatatctcaggagctttattgcctaatgttagatccctttttggattgaag 165
Query: 160 ggagctcta 168
|||||||||
Sbjct: 166 ggagctcta 174
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 87.7 bits (44), Expect = 2e-18
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 100 tgcggcttgcatatctcaggagctttattacctaatgttagatcnnnnnnnggattgaag 159
||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 106 tgcggcttgcatatctcaggagctttattgcctaatgttagatccctttttggattgaag 165
Query: 160 ggagctcta 168
|||||||||
Sbjct: 166 ggagctcta 174
>40397_ahy-MIR159:mirbase
Length = 197
Score = 73.8 bits (37), Expect = 4e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 60
|||||||||||||||||||| ||| | || || ||||||||| |||||||| |||||||
Sbjct: 3 tggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgg 62
Query: 61 atcccacag 69
|||||||||
Sbjct: 63 atcccacag 71
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 65.9 bits (33), Expect = 9e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 60
||||||||||||||||||||| || | || | |||||| ||| |||||||| |||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 atcccacag 69
|||||||||
Sbjct: 62 atcccacag 70
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 65.9 bits (33), Expect = 9e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 60
||||||||||||||||||||| || | || | |||||| ||| |||||||| |||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 atcccacag 69
|||||||||
Sbjct: 62 atcccacag 70
>40432_gma-MIR159a:mirbase
Length = 214
Score = 58.0 bits (29), Expect = 2e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 60
||||||||||||||||||||| || | || | |||||| || |||||||| |||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 61 atcccacag 69
|||||||||
Sbjct: 81 atcccacag 89
>41218_csi-MIR159:mirbase
Length = 216
Score = 56.0 bits (28), Expect = 9e-09
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagctcctgct-gggtagatcgagctgctgagctatg 59
|||||||||||||||||||| ||| | || || ||||| || ||||||||||||||||
Sbjct: 12 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 71
Query: 60 aatcccacagccctat 75
||||||||| |||||
Sbjct: 72 gatcccacagtcctat 87
>39804_aly-MIR159a:mirbase
Length = 222
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 103 ggcttgcatatctcaggagcttta 126
||||||||||||||||||||||||
Sbjct: 131 ggcttgcatatctcaggagcttta 154
>40016_ath-MIR159a:mirbase
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 106 ttgcatatctcaggagcttta 126
|||||||||||||||||||||
Sbjct: 114 ttgcatatctcaggagcttta 134
>41528_sly-MIR159:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaa 20
>40311_bra-MIR159a:mirbase
Length = 185
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 103 ggcttgcatatctcaggagcttta 126
||||| ||||||||||||||||||
Sbjct: 111 ggcttacatatctcaggagcttta 134
>40261_bna-MIR159:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 103 ggcttgcatatctcaggagcttta 126
||||| ||||||||||||||||||
Sbjct: 109 ggcttacatatctcaggagcttta 132
