miRNEST 2.0, an integrative microRNA resource :: BLAST
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 75.8 bits (38), Expect = 9e-15
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaat 60
|||||||||||||||||||||||| | |||| ||| ||| |||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 72
Query: 61 tccaca 66
|||||
Sbjct: 73 cccaca 78
Score = 48.1 bits (24), Expect = 2e-06
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 105 ggcttgcatacctcaggagctgcattacctga-gttgcatcatgttttggattgaaggga 163
|||||||||| |||||||||| ||||||| | ||| ||| | ||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagctttattacctaatgttagatctttttttggattgaaggga 172
Query: 164 gctc 167
||||
Sbjct: 173 gctc 176
>40338_rco-MIR159:mirbase
Length = 180
Score = 75.8 bits (38), Expect = 9e-15
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaat 60
|||||||||||||||||||||| ||| ||| | ||| |||||||||||||||||||| ||
Sbjct: 6 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 65
Query: 61 tccaca 66
|||||
Sbjct: 66 cccaca 71
Score = 65.9 bits (33), Expect = 9e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 94 gataggcttgtggcttgcatacctcaggagctgcattacct 134
||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 99 gataggcttgtggcttgcatatctcaggagcttcattacct 139
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 94 gataggcttgtggcttgcatacctcaggagctgcatta 131
||||||||||||||||||||| ||||||||||||||||
Sbjct: 104 gataggcttgtggcttgcatatctcaggagctgcatta 141
Score = 54.0 bits (27), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctga 51
|||||||||||||||||||||| | | || || ||| ||||||||||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctga 61
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 63.9 bits (32), Expect = 4e-11
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaat 60
||||||||||||||||||| || ||| || || ||| |||||||||||| ||||||| ||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 tccacacttcta 72
||||| |||||
Sbjct: 64 cccacagttcta 75
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 63.9 bits (32), Expect = 4e-11
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaat 60
||||||||||||||||||| || ||| || || ||| |||||||||||| ||||||| ||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 tccacacttcta 72
||||| |||||
Sbjct: 64 cccacagttcta 75
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 58.0 bits (29), Expect = 2e-09
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 57
|||||||||||||||||||||| | | ||||| ||| |||| ||||||| |||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 ttttggattgaagggagctc 167
||||||||||||||||||||
Sbjct: 153 ttttggattgaagggagctc 172
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 58.0 bits (29), Expect = 2e-09
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 57
|||||||||||||||||||||| | | ||||| ||| |||| ||||||| |||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 ttttggattgaagggagctc 167
||||||||||||||||||||
Sbjct: 153 ttttggattgaagggagctc 172
>40432_gma-MIR159a:mirbase
Length = 214
Score = 56.0 bits (28), Expect = 9e-09
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaat 60
||||||||||||||||||| || ||| || || ||| ||||||||||| ||||||| ||
Sbjct: 23 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 82
Query: 61 tccacacttcta 72
||||| |||||
Sbjct: 83 cccacagttcta 94
>40397_ahy-MIR159:mirbase
Length = 197
Score = 52.0 bits (26), Expect = 1e-07
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaat 60
|||||||||||||||||| ||| | | ||| | ||| |||||||||||| ||||||| ||
Sbjct: 5 gagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatggat 64
Query: 61 tccaca 66
|||||
Sbjct: 65 cccaca 70
>42635_tae-MIR159b:mirbase
Length = 255
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 94 gataggcttgtggcttgcatacctcaggagctgcat 129
||||||||| |||||||||| || ||||||||||||
Sbjct: 175 gataggcttatggcttgcatgccccaggagctgcat 210
>41917_osa-MIR159a:mirbase
Length = 272
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 94 gataggcttgtggcttgcatacctcaggagctgcat 129
||||||||| |||||||||| || ||||||||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcat 222
>41916_osa-MIR159a:mirbase
Length = 272
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 94 gataggcttgtggcttgcatacctcaggagctgcat 129
||||||||| |||||||||| || ||||||||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcat 222
>41218_csi-MIR159:mirbase
Length = 216
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 91 gatgataggcttgtggcttgcata 114
||||||||||||||||||||||||
Sbjct: 122 gatgataggcttgtggcttgcata 145
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 39 attgagctgctgagctatgaattccaca 66
||||||||||||||||||| || |||||
Sbjct: 53 attgagctgctgagctatggatcccaca 80
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 ttttggattgaagggagctc 167
||||||||||||||||||||
Sbjct: 185 ttttggattgaagggagctc 204
>41528_sly-MIR159:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 142 atcatgttttggattgaagggagctc 167
||||| ||||||||||||||||||||
Sbjct: 150 atcattttttggattgaagggagctc 175
