miRNEST 2.0, an integrative microRNA resource :: BLAST
>41212_ccl-MIR396:mirbase
Length = 277
Score = 218 bits (110), Expect = 6e-58
Identities = 110/110 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttccactgtttgctgattaatacacggctcttgctagctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ttccacagctttcttgaacttccactgtttgctgattaatacacggctcttgctagctag 202
Query: 61 gcgccgtatgtagacaccgcgcgccatgggagctcaagaaagctgtggga 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gcgccgtatgtagacaccgcgcgccatgggagctcaagaaagctgtggga 252
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 81 gcgccatgggagctcaagaaagctgtggga 110
||||||||| ||||||||||||||||||||
Sbjct: 108 gcgccatggaagctcaagaaagctgtggga 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaacttc 32
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttcc 23
|||||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaacttcc 54
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttcc 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaacttcc 33
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttcc 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaacttcc 33
>42812_zma-MIR396f:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaacttc 23
>42811_zma-MIR396e:mirbase
Length = 166
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaacttc 23
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttc 42
>42028_osa-MIR396c:mirbase
Length = 141
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaacttc 32
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaacttc 35
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 3 ccacagctttcttgaacttc 22
||||||||||||||||||||
Sbjct: 95 ccacagctttcttgaacttc 76
>41243_csi-MIR396c:mirbase
Length = 178
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 13 ttccacagctttcttgaacttc 34
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttc 42
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaacttc 27
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 agctcaagaaagctgtggga 110
||||||||||||||||||||
Sbjct: 69 agctcaagaaagctgtggga 88
>40476_gma-MIR396d:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaacttc 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 agctcaagaaagctgtggga 110
||||||||||||||||||||
Sbjct: 78 agctcaagaaagctgtggga 97
>40475_gma-MIR396c:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttc 42
>40474_gma-MIR396b:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttc 42
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 agctcaagaaagctgtggga 110
||||||||||||||||||||
Sbjct: 88 agctcaagaaagctgtggga 107
>40379_rco-MIR396:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaacttc 27
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactt 21
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactt 21
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactt 21
|||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactt 41
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 agctcaagaaagctgtggga 110
||||||||||||||||||||
Sbjct: 111 agctcaagaaagctgtggga 130
>40296_bna-MIR396a:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactt 21
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactt 21
>40086_ath-MIR396b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactt 21
|||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactt 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 agctcaagaaagctgtggga 110
||||||||||||||||||||
Sbjct: 106 agctcaagaaagctgtggga 125
>39878_aly-MIR396b:mirbase
Length = 188
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactt 21
|||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaactt 52
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 agctcaagaaagctgtggga 110
||||||||||||||||||||
Sbjct: 134 agctcaagaaagctgtggga 153
>39426_pta-MIR396:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactt 21
|||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaactt 37
>39379_pab-MIR396a:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 gagctcaagaaagctgtggga 110
|||||||||||||||||||||
Sbjct: 63 gagctcaagaaagctgtggga 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
>42814_zma-MIR396h:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaact 79
>42813_zma-MIR396g:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaact 92
>42808_zma-MIR396b:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42807_zma-MIR396a:mirbase
Length = 137
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42472_ssp-MIR396:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>42461_sof-MIR396:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42027_osa-MIR396b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>42026_osa-MIR396a:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 agctcaagaaagctgtggga 110
||||||||||||||||||||
Sbjct: 86 agctcaagaaagctgtggga 105
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41242_csi-MIR396b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 20 ttccacagctttcttgaact 39
>41241_csi-MIR396a:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40646_lja-MIR396:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
>40477_gma-MIR396e:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 7 ttccacagctttcttgaact 26
>40473_gma-MIR396a:mirbase
Length = 140
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40085_ath-MIR396a:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39877_aly-MIR396a:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 24 ttccacagctttcttgaact 43
>39741_smo-MIR396:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 3 ccacagctttcttgaacttc 22
||||||||||||||||||||
Sbjct: 153 ccacagctttcttgaacttc 134
