miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41027_pvu-MIR399a:mirbase
          Length = 223

 Score =  113 bits (57), Expect = 2e-26
 Identities = 66/69 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggcttctctttgttggcaggaaatgacatgatcatctcatgaaatatcttgccaaagga 60
           |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||
Sbjct: 39  gggcttctctttgttggcaggaaatgacatgaccacttcatgaaatatcttgccaaagga 98

                    
Query: 61  gagttgccc 69
           |||||||||
Sbjct: 99  gagttgccc 107




>41456_ptc-MIR399i:mirbase
          Length = 108

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 48 tcttgccaaaggagagttgccc 69
          ||||||||||||||||||||||
Sbjct: 76 tcttgccaaaggagagttgccc 97




>40746_mtr-MIR399p:mirbase
          Length = 79

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 44 aatatcttgccaaaggagagttgccc 69
          |||| |||||||||||||||||||||
Sbjct: 47 aataacttgccaaaggagagttgccc 72




>40742_mtr-MIR399l:mirbase
          Length = 79

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 44 aatatcttgccaaaggagagttgccc 69
          |||| |||||||||||||||||||||
Sbjct: 47 aataacttgccaaaggagagttgccc 72




>41669_vvi-MIR399b:mirbase
          Length = 117

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 49  cttgccaaaggagagttgccc 69
           |||||||||||||||||||||
Sbjct: 85  cttgccaaaggagagttgccc 105




>41154_tcc-MIR399i:mirbase
          Length = 157

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 49  cttgccaaaggagagttgccc 69
           |||||||||||||||||||||
Sbjct: 115 cttgccaaaggagagttgccc 135




>40383_rco-MIR399a:mirbase
          Length = 93

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 49 cttgccaaaggagagttgccc 69
          |||||||||||||||||||||
Sbjct: 66 cttgccaaaggagagttgccc 86




>40094_ath-MIR399c:mirbase
          Length = 114

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 49  cttgccaaaggagagttgccc 69
           |||||||||||||||||||||
Sbjct: 82  cttgccaaaggagagttgccc 102




>39886_aly-MIR399c:mirbase
          Length = 125

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 49  cttgccaaaggagagttgccc 69
           |||||||||||||||||||||
Sbjct: 87  cttgccaaaggagagttgccc 107




>42828_zma-MIR399j:mirbase
          Length = 175

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 154 tgccaaaggagagttgccc 172




>42827_zma-MIR399i:mirbase
          Length = 91

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 51 tgccaaaggagagttgccc 69
          |||||||||||||||||||
Sbjct: 70 tgccaaaggagagttgccc 88




>42823_zma-MIR399e:mirbase
          Length = 124

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 85  tgccaaaggagagttgccc 103




>42597_sbi-MIR399i:mirbase
          Length = 121

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 82  tgccaaaggagagttgccc 100




>42592_sbi-MIR399d:mirbase
          Length = 205

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 166 tgccaaaggagagttgccc 184




>42050_osa-MIR399j:mirbase
          Length = 106

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 51 tgccaaaggagagttgccc 69
          |||||||||||||||||||
Sbjct: 76 tgccaaaggagagttgccc 94




>42044_osa-MIR399d:mirbase
          Length = 286

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 256 tgccaaaggagagttgccc 274




>41670_vvi-MIR399c:mirbase
          Length = 82

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 51 tgccaaaggagagttgccc 69
          |||||||||||||||||||
Sbjct: 52 tgccaaaggagagttgccc 70




>41548_sly-MIR399:mirbase
          Length = 71

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 51 tgccaaaggagagttgccc 69
          |||||||||||||||||||
Sbjct: 51 tgccaaaggagagttgccc 69




>41249_csi-MIR399d:mirbase
          Length = 130

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 100 tgccaaaggagagttgccc 118




>41247_csi-MIR399b:mirbase
          Length = 168

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 125 tgccaaaggagagttgccc 143




>41192_aqc-MIR399:mirbase
          Length = 98

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 51 tgccaaaggagagttgccc 69
          |||||||||||||||||||
Sbjct: 72 tgccaaaggagagttgccc 90




>40093_ath-MIR399b:mirbase
          Length = 135

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 105 tgccaaaggagagttgccc 123




>39885_aly-MIR399b:mirbase
          Length = 154

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 106 tgccaaaggagagttgccc 124