miRNEST 2.0, an integrative microRNA resource :: BLAST
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 67.9 bits (34), Expect = 2e-12
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgg 59
|||||||||||||||||||| ||||| | |||| ||||| || |||||||||| ||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 60 attccacagtccta 73
| ||||||||||||
Sbjct: 71 a-tccacagtccta 83
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 93 ggataggcttgcggcttgcatatgttaggagcttt 127
||||||| ||||||||||||||| | |||||||||
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagcttt 131
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 67.9 bits (34), Expect = 2e-12
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgg 59
|||||||||||||||||||| ||||| | |||| ||||| || |||||||||| ||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 60 attccacagtccta 73
| ||||||||||||
Sbjct: 71 a-tccacagtccta 83
>41528_sly-MIR159:mirbase
Length = 177
Score = 61.9 bits (31), Expect = 1e-10
Identities = 59/66 (89%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 108 ttgcatatgttaggagcttt--tttacctctttgttttatctttctttggattgaaggga 165
|||||||||| ||||||||| |||||| |||||||| ||| || |||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttacc-ctttgtttgatcattttttggattgaaggga 171
Query: 166 gctcta 171
||||||
Sbjct: 172 gctcta 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaa 20
>41218_csi-MIR159:mirbase
Length = 216
Score = 61.9 bits (31), Expect = 1e-10
Identities = 66/75 (88%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggat-ttgc-agggtaaatcaagctgctaatctatg 58
|||||||||||||||||||||||||| | | || ||||||||| ||||||| | |||||
Sbjct: 12 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 71
Query: 59 gattccacagtccta 73
||| |||||||||||
Sbjct: 72 gatcccacagtccta 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 146 ctttctttggattgaagggagctcta 171
|||| |||||||||||||||||||||
Sbjct: 181 ctttttttggattgaagggagctcta 206
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 60.0 bits (30), Expect = 6e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 102 tgcggcttgcatatgttaggagcttttttacctctttgttttatctttctttggattgaa 161
|||||||||||||| | ||||||||| |||||| | ||| |||||| |||||||||||
Sbjct: 110 tgcggcttgcatatctcaggagctttattacctaat-gttagatctttttttggattgaa 168
Query: 162 gggagctcta 171
||||||||||
Sbjct: 169 gggagctcta 178
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaa 30
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 139 gttttatctttctttggattgaagggagctcta 171
|||| ||||||||||||||||||||||||||||
Sbjct: 140 gtttaatctttctttggattgaagggagctcta 172
>40338_rco-MIR159:mirbase
Length = 180
Score = 54.0 bits (27), Expect = 4e-08
Identities = 67/79 (84%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 93 ggataggcttgcggcttgcatatgttaggagcttttttacctctttgttttatctttctt 152
||||||||||| ||||||||||| | |||||||| |||||| | | || ||| || ||
Sbjct: 98 ggataggcttgtggcttgcatatctcaggagcttcattacct-tgtattagatccttgtt 156
Query: 153 tggattgaagggagctcta 171
|||||||||||||||||||
Sbjct: 157 tggattgaagggagctcta 175
Score = 52.0 bits (26), Expect = 1e-07
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgg 59
|||||||||||||||||||| ||||||| ||| ||||| || ||||||| | ||||||
Sbjct: 4 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 63
Query: 60 attccacagtccta 73
|| |||||| ||||
Sbjct: 64 atcccacagcccta 77
>40397_ahy-MIR159:mirbase
Length = 197
Score = 52.0 bits (26), Expect = 1e-07
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgg 59
|||||||||||||||||||| ||||| | ||| ||||| || ||||||||| ||||||
Sbjct: 3 tggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgg 62
Query: 60 attccacagt 69
|| |||||||
Sbjct: 63 atcccacagt 72
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 148 ttctttggattgaagggagctcta 171
||||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctcta 173
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 2 tggagctccttgaagtccaa 21
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 148 ttctttggattgaagggagctcta 171
||||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctcta 173
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 2 tggagctccttgaagtccaa 21
>40432_gma-MIR159a:mirbase
Length = 214
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 148 ttctttggattgaagggagctcta 171
||||||||||||||||||||||||
Sbjct: 172 ttctttggattgaagggagctcta 195
Score = 44.1 bits (22), Expect = 3e-05
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgg 59
|||||||||||||||||||| |||||| || | |||| ||| ||||||| | ||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 60 attccacagt 69
|| |||||||
Sbjct: 81 atcccacagt 90
>40311_bra-MIR159a:mirbase
Length = 185
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 148 ttctttggattgaagggagctcta 171
||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctcta 183
>40261_bna-MIR159:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 148 ttctttggattgaagggagctcta 171
||||||||||||||||||||||||
Sbjct: 158 ttctttggattgaagggagctcta 181
>40016_ath-MIR159a:mirbase
Length = 184
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 148 ttctttggattgaagggagctcta 171
||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctcta 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 148 ttctttggattgaagggagctcta 171
||||||||||||||||||||||||
Sbjct: 180 ttctttggattgaagggagctcta 203
>40017_ath-MIR159b:mirbase
Length = 196
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 148 ttctttggattgaagggagctct 170
|||||||||||||||||||||||
Sbjct: 165 ttctttggattgaagggagctct 187
>39805_aly-MIR159b:mirbase
Length = 202
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 148 ttctttggattgaagggagctct 170
|||||||||||||||||||||||
Sbjct: 166 ttctttggattgaagggagctct 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 53/61 (86%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaaaagaggattt-gcagggtaaa-tcaagctgctaatctatgga 60
|||||||||||||| ||| |||| ||| |||||||||| | |||||||||| |||||||
Sbjct: 17 gagctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatgga 76
Query: 61 t 61
|
Sbjct: 77 t 77
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42690_zma-MIR159a:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>42635_tae-MIR159b:mirbase
Length = 255
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>42494_sbi-MIR159:mirbase
Length = 226
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctct 223
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 221 tctttggattgaagggagctct 242
>42455_sof-MIR159d:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>42453_sof-MIR159b:mirbase
Length = 266
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>42452_sof-MIR159a:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>41918_osa-MIR159b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>41917_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41868_far-MIR159:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 167 tctttggattgaagggagctct 188
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagagg 26
|||||||||||||||||||| |||||
Sbjct: 9 tggagctccttgaagtccaatagagg 34
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 93 ggataggcttgcggcttgcatatgttaggagct 125
||||||||||| ||||||||||| | |||||||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagct 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctcta 180
