miRNEST 2.0, an integrative microRNA resource :: BLAST
>41118_tcc-MIR171c:mirbase
Length = 123
Score = 141 bits (71), Expect = 9e-35
Identities = 80/83 (96%)
Strand = Plus / Plus
Query: 1 atgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacgat 60
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 20 atgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcgtaaaatacgat 79
Query: 61 ctcagattgagccgcgccaatat 83
|||||||||||||||||||||||
Sbjct: 80 ctcagattgagccgcgccaatat 102
>40699_mtr-MIR171e:mirbase
Length = 93
Score = 103 bits (52), Expect = 2e-23
Identities = 76/83 (91%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 1 atgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacgat 60
|||||||||||||||||||||||||||||||||| || || ||| ||||||||||||
Sbjct: 7 atgttggtgaggttcaatccgaagacggatttac--atgtatagagttgtaaaatacgat 64
Query: 61 ctcagattgagccgcgccaatat 83
|||||||||||||||||||||||
Sbjct: 65 ctcagattgagccgcgccaatat 87
>41383_ptc-MIR171c:mirbase
Length = 104
Score = 85.7 bits (43), Expect = 4e-18
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 1 atgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacgat 60
|||||||||||||||||||||||||||||||||| | | | | ||||||||||||
Sbjct: 12 atgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaatacgat 71
Query: 61 ctcagattgagccgcgccaatat 83
|||||||||||||||||||||||
Sbjct: 72 ctcagattgagccgcgccaatat 94
>40365_rco-MIR171g:mirbase
Length = 89
Score = 83.8 bits (42), Expect = 2e-17
Identities = 73/83 (87%), Gaps = 4/83 (4%)
Strand = Plus / Plus
Query: 1 atgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacgat 60
|||||||||||||||||||||||||||||||||| |||| || ||||| |||||
Sbjct: 5 atgttggtgaggttcaatccgaagacggatttac----acattctgttgtaaaggacgat 60
Query: 61 ctcagattgagccgcgccaatat 83
|||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatat 83
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 79.8 bits (40), Expect = 3e-16
Identities = 72/83 (86%), Gaps = 6/83 (7%)
Strand = Plus / Plus
Query: 1 atgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacgat 60
||||||||||||||||||||||||||||||||||||| || |||||| |||||
Sbjct: 13 atgttggtgaggttcaatccgaagacggatttacgaa------gagccgtaaagaacgat 66
Query: 61 ctcagattgagccgcgccaatat 83
||| |||||||||||||||||||
Sbjct: 67 ctctgattgagccgcgccaatat 89
>41541_sly-MIR171d:mirbase
Length = 112
Score = 65.9 bits (33), Expect = 4e-12
Identities = 72/83 (86%), Gaps = 4/83 (4%)
Strand = Plus / Plus
Query: 1 atgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacgat 60
||||||||||||||||||||||||||| ||||| | | ||| ||||||| |||||
Sbjct: 13 atgttggtgaggttcaatccgaagacgaatttatg--cttatt--ttcgtaaagaacgat 68
Query: 61 ctcagattgagccgcgccaatat 83
|||||||||||||||||||||||
Sbjct: 69 ctcagattgagccgcgccaatat 91
>41384_ptc-MIR171d:mirbase
Length = 100
Score = 61.9 bits (31), Expect = 6e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 49 gtaaaatacgatctcagattgagccgcgccaatat 83
||||||| |||||||||||||||||||||||||||
Sbjct: 56 gtaaaatccgatctcagattgagccgcgccaatat 90
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 atgttggtgaggttcaatccgaagacggatttac 34
|||||||||||||||||||||||||| |||||||
Sbjct: 12 atgttggtgaggttcaatccgaagacagatttac 45
>41627_vvi-MIR171f:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 gatctcagattgagccgcgccaatat 83
||||||||||||||||||||||||||
Sbjct: 64 gatctcagattgagccgcgccaatat 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 atgttggtgaggttcaatccgaaga 25
||||||||||||||||||| |||||
Sbjct: 13 atgttggtgaggttcaatctgaaga 37
>39479_ppt-MIR171b:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 61 ctcagattgagccgcgccaatat 83
|||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatat 83
>41117_tcc-MIR171b:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 tcagattgagccgcgccaatat 83
||||||||||||||||||||||
Sbjct: 78 tcagattgagccgcgccaatat 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 atgttggtgaggttcaatccgaaga 25
||||||||||||||||||| |||||
Sbjct: 22 atgttggtgaggttcaatctgaaga 46
>39478_ppt-MIR171a:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 tcagattgagccgcgccaatat 83
||||||||||||||||||||||
Sbjct: 61 tcagattgagccgcgccaatat 82
>39739_smo-MIR171d:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 60 tctcagattgagccgcgccaatat 83
||||| ||||||||||||||||||
Sbjct: 65 tctcaaattgagccgcgccaatat 88
>42774_zma-MIR171n:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 4 ttggtgaggttcaatccga 22
|||||||||||||||||||
Sbjct: 4 ttggtgaggttcaatccga 22
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgcgccaatat 83
|||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatat 76
>42761_zma-MIR171a:mirbase
Length = 99
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgcgccaatat 83
|||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatat 98
>42555_sbi-MIR171j:mirbase
Length = 108
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgcgccaatat 83
|||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatat 102
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 4 ttggtgaggttcaatccga 22
|||||||||||||||||||
Sbjct: 3 ttggtgaggttcaatccga 21
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgcgccaatat 83
|||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatat 76
>41981_osa-MIR171a:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 4 ttggtgaggttcaatccga 22
|||||||||||||||||||
Sbjct: 14 ttggtgaggttcaatccga 32
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgcgccaatat 83
|||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatat 86
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgcgccaatat 83
|||||||||||||||||||
Sbjct: 51 gattgagccgcgccaatat 69
>41540_sly-MIR171c:mirbase
Length = 121
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgcgccaatat 83
|||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatat 97
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgcgccaatat 83
|||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatat 77
>41231_csi-MIR171a:mirbase
Length = 97
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgcgccaatat 83
|||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatat 86
>41211_ccl-MIR171:mirbase
Length = 321
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgcgccaatat 83
|||||||||||||||||||
Sbjct: 123 gattgagccgcgccaatat 141
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgcgccaatat 83
|||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatat 98
>40322_bra-MIR171e:mirbase
Length = 119
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgcgccaatat 83
|||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatat 103
>40291_bna-MIR171g:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgcgccaatat 83
|||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatat 77
>40290_bna-MIR171f:mirbase
Length = 119
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgcgccaatat 83
|||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatat 103
>40060_ath-MIR171a:mirbase
Length = 123
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgcgccaatat 83
|||||||||||||||||||
Sbjct: 89 gattgagccgcgccaatat 107
>39849_aly-MIR171a:mirbase
Length = 198
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgcgccaatat 83
|||||||||||||||||||
Sbjct: 131 gattgagccgcgccaatat 149
