miRNEST 2.0, an integrative microRNA resource :: BLAST
>41218_csi-MIR159:mirbase
Length = 216
Score = 77.8 bits (39), Expect = 2e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgc-agggtaaatcaagctgctgatctatg 59
|||||||||||||||||||||||||| | | || ||||||||| ||||||||| |||||
Sbjct: 12 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 71
Query: 60 gattccacagtccta 74
||| |||||||||||
Sbjct: 72 gatcccacagtccta 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 145 ctttctttggattgaagggagctcta 170
|||| |||||||||||||||||||||
Sbjct: 181 ctttttttggattgaagggagctcta 206
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 69.9 bits (35), Expect = 6e-13
Identities = 140/172 (81%), Gaps = 6/172 (3%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| ||| | | ||| ||||| ||| ||||||||| |||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 70
Query: 61 attccacagtccta--accctaattaattatggggataggcttgcggcttgcatatgtta 118
|| |||||| |||| ||| | | | ||| || || ||| |||||||||||||| | |
Sbjct: 71 atcccacagccctatcaccatcagtcattttg---atgggcctgcggcttgcatatctca 127
Query: 119 ggagctttattacctctttgttttatctttctttggattgaagggagctcta 170
||||||||||||||| |||| |||||| |||||||||||||||||||||
Sbjct: 128 ggagctttattacct-aatgttagatctttttttggattgaagggagctcta 178
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 67.9 bits (34), Expect = 2e-12
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| ||||| | |||| ||||| || |||||||| | ||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 attccacagtccta 74
| ||||||||||||
Sbjct: 71 a-tccacagtccta 83
Score = 54.0 bits (27), Expect = 3e-08
Identities = 67/79 (84%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 92 ggataggcttgcggcttgcatatgttaggagctttattacctctttgttttatctttctt 151
||||||| ||||||||||||||| | |||||||||||| ||| |||| ||| | ||
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttattgcct-aatgttagatccctttt 155
Query: 152 tggattgaagggagctcta 170
|||||||||||||||||||
Sbjct: 156 tggattgaagggagctcta 174
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 67.9 bits (34), Expect = 2e-12
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| ||||| | |||| ||||| || |||||||| | ||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 attccacagtccta 74
| ||||||||||||
Sbjct: 71 a-tccacagtccta 83
>40338_rco-MIR159:mirbase
Length = 180
Score = 67.9 bits (34), Expect = 2e-12
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| ||||||| ||| ||||| || ||||||||| ||||||
Sbjct: 4 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 63
Query: 61 attccacagtccta 74
|| |||||| ||||
Sbjct: 64 atcccacagcccta 77
Score = 61.9 bits (31), Expect = 1e-10
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 92 ggataggcttgcggcttgcatatgttaggagctttattacctctttgttttatctttctt 151
||||||||||| ||||||||||| | |||||||| ||||||| | | || ||| || ||
Sbjct: 98 ggataggcttgtggcttgcatatctcaggagcttcattacct-tgtattagatccttgtt 156
Query: 152 tggattgaagggagctcta 170
|||||||||||||||||||
Sbjct: 157 tggattgaagggagctcta 175
>41528_sly-MIR159:mirbase
Length = 177
Score = 61.9 bits (31), Expect = 1e-10
Identities = 59/66 (89%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 107 ttgcatatgttaggagctttatt--acctctttgttttatctttctttggattgaaggga 164
|||||||||| |||||||||||| ||| |||||||| ||| || |||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttacc-ctttgtttgatcattttttggattgaaggga 171
Query: 165 gctcta 170
||||||
Sbjct: 172 gctcta 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| | | || | |||| ||||| ||||||||| ||||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 61 attccacagtccta 74
||||| ||| ||||
Sbjct: 61 attcctcagcccta 74
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 138 gttttatctttctttggattgaagggagctcta 170
|||| ||||||||||||||||||||||||||||
Sbjct: 140 gtttaatctttctttggattgaagggagctcta 172
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 52.0 bits (26), Expect = 1e-07
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| ||||| | || | ||||| || ||||||||| |||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
Query: 61 attccacagtccta 74
|| |||||| ||||
Sbjct: 69 atcccacagcccta 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 92 ggataggcttgcggcttgcatatgttaggagct 124
||||||||||| ||||||||||| | |||||||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagct 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctcta 170
|||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctcta 180
>40432_gma-MIR159a:mirbase
Length = 214
Score = 52.0 bits (26), Expect = 1e-07
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| |||||| || | |||| ||| ||||||| | ||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 61 attccacagt 70
|| |||||||
Sbjct: 81 atcccacagt 90
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctcta 170
||||||||||||||||||||||||
Sbjct: 172 ttctttggattgaagggagctcta 195
>40397_ahy-MIR159:mirbase
Length = 197
Score = 52.0 bits (26), Expect = 1e-07
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| ||||| | ||| ||||| || ||||||| | ||||||
Sbjct: 3 tggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgg 62
Query: 61 attccacagt 70
|| |||||||
Sbjct: 63 atcccacagt 72
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctcta 170
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctcta 170
||||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctcta 173
Score = 44.1 bits (22), Expect = 3e-05
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| |||||| || | |||| || ||||||| | ||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 attccacagt 70
|| |||||||
Sbjct: 62 atcccacagt 71
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctcta 170
||||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctcta 173
Score = 44.1 bits (22), Expect = 3e-05
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| |||||| || | |||| || ||||||| | ||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 attccacagt 70
|| |||||||
Sbjct: 62 atcccacagt 71
>40311_bra-MIR159a:mirbase
Length = 185
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctcta 170
||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctcta 183
>40261_bna-MIR159:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctcta 170
||||||||||||||||||||||||
Sbjct: 158 ttctttggattgaagggagctcta 181
>40016_ath-MIR159a:mirbase
Length = 184
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctcta 170
||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctcta 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctcta 170
||||||||||||||||||||||||
Sbjct: 180 ttctttggattgaagggagctcta 203
>40017_ath-MIR159b:mirbase
Length = 196
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 165 ttctttggattgaagggagctct 187
>39805_aly-MIR159b:mirbase
Length = 202
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 166 ttctttggattgaagggagctct 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 52/61 (85%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaaaagaggattttgcagggtaaa-tcaagctgctgatctatgga 61
|||||||||||||| ||| |||| ||| |||||||||| | |||||||| | |||||||
Sbjct: 17 gagctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatgga 76
Query: 62 t 62
|
Sbjct: 77 t 77
