miRNEST 2.0, an integrative microRNA resource :: BLAST
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 83.8 bits (42), Expect = 2e-17
Identities = 79/89 (88%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcct--gaatttggctgtggaagaacacaaagca 58
|||||||||||||||||||||||||||||| |||||||| |||| || | |||| | ||
Sbjct: 13 ctggaggcagcggttcatcgatctcttcctgggaatttgg-tgtgaaaaatcacagaaca 71
Query: 59 agaatcggtcgataaacctctgcatccag 87
|||||| |||||||||||||||||||||
Sbjct: 72 tgaatcgatcgataaacctctgcatccag 100
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 79.8 bits (40), Expect = 3e-16
Identities = 81/91 (89%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctga--atttggctgtg-gaagaacacaaag- 56
|||||||||||||||||||||||||||||||| |||| | |||| ||| ||||||||
Sbjct: 24 ctggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaata 83
Query: 57 caagaatcggtcgataaacctctgcatccag 87
|| |||||| |||||||||||||||||||||
Sbjct: 84 catgaatcgatcgataaacctctgcatccag 114
>41578_vvi-MIR162:mirbase
Length = 103
Score = 77.8 bits (39), Expect = 1e-15
Identities = 77/87 (88%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgaatttggctgtggaagaacacaaagcaag 60
||||| ||||||||||||||||||||||||||| ||| |||| || || || | ||||
Sbjct: 9 ctggatgcagcggttcatcgatctcttcctgaaattgt-tgtgaaaaaag-cagatcaag 66
Query: 61 aatcggtcgataaacctctgcatccag 87
|||||||||||||||||||||||||||
Sbjct: 67 aatcggtcgataaacctctgcatccag 93
>41090_tcc-MIR162:mirbase
Length = 131
Score = 71.9 bits (36), Expect = 7e-14
Identities = 80/91 (87%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg--aatttggctgtg-gaagaacacaaag- 56
||||||||||||||||||||||||||||||| ||||| | |||| ||| ||||||||
Sbjct: 21 ctggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataacacaaata 80
Query: 57 caagaatcggtcgataaacctctgcatccag 87
|| || ||| |||||||||||||||||||||
Sbjct: 81 catgattcgatcgataaacctctgcatccag 111
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatctcttcctg 41
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tcgataaacctctgcatccag 87
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>40342_rco-MIR162:mirbase
Length = 101
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 4 ctggaggcagcggttcatcgatctcttcctg 34
>40025_ath-MIR162b:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 53 aaagcaagaatcggtcgataaacctctgcatccag 87
||||||||||||| |||||||||||||||||||||
Sbjct: 65 aaagcaagaatcgatcgataaacctctgcatccag 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 12 ctggaggcagcggttcatcgatc 34
>40024_ath-MIR162a:mirbase
Length = 140
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 25 ctggaggcagcggttcatcgatctcttcctg 55
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 53 aaagcaagaatcggtcgataaacctctgcatccag 87
|||||| |||| | |||||||||||||||||||||
Sbjct: 75 aaagcatgaatagatcgataaacctctgcatccag 109
>39812_aly-MIR162a:mirbase
Length = 228
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 68 ctggaggcagcggttcatcgatctcttcctg 98
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 53 aaagcaagaatcggtcgataaacctctgcatccag 87
|||||| |||| | |||||||||||||||||||||
Sbjct: 122 aaagcatgaatagatcgataaacctctgcatccag 156
>40437_gma-MIR162:mirbase
Length = 102
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgaat 34
||||| ||||||||||||||||||||||||||||
Sbjct: 10 ctggatgcagcggttcatcgatctcttcctgaat 43
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
|||||| |||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatccag 93
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgaa 33
|||||||||||||||||||||||| ||||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctgaa 43
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tcgataaacctctgcatccag 87
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgaa 33
|||||||||||||||||||||||| ||||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctgaa 43
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tcgataaacctctgcatccag 87
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>42708_zma-MIR162:mirbase
Length = 130
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
||||||||||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41530_sly-MIR162:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
||||||||||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>40663_mtr-MIR162:mirbase
Length = 124
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgaattt 36
||||| |||||||||||||||||| |||||||||||
Sbjct: 21 ctggatgcagcggttcatcgatctgttcctgaattt 56
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
||||||||||||||||||||||||||||
Sbjct: 80 gaatcggtcgataaacctctgcatccag 107
>39813_aly-MIR162b:mirbase
Length = 184
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 53 aaagcaagaatcggtcgataaacctctgcatccag 87
|||||| |||||| |||||||||||||||||||||
Sbjct: 99 aaagcatgaatcgatcgataaacctctgcatccag 133
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 50 ctggaggcagcggttcatcgatc 72
>42502_sbi-MIR162:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
|||||| |||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
|||||| |||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41220_csi-MIR162:mirbase
Length = 201
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
|||||| |||||||||||||||||||||
Sbjct: 154 gaatcgatcgataaacctctgcatccag 181
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 89 ctggaggcagcggttcatcgatc 111
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatcc 85
|||||| |||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>41930_osa-MIR162b:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 6e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 51 acaaagcaagaatcggtcgataaacctctgcatccag 87
|||| ||| |||||| ||||||| |||||||||||||
Sbjct: 88 acaacgcaggaatcgatcgataagcctctgcatccag 124
