miRNEST 2.0, an integrative microRNA resource :: BLAST
>41447_ptc-MIR398c:mirbase
Length = 97
Score = 107 bits (54), Expect = 1e-24
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1 caggagcgacctggaat-acatgtgggctccaccctcctgggttctcttgggcaacatgt 59
||||||||||||| ||| ||||||||||| |||||||||||||| ||||| |||||||||
Sbjct: 11 caggagcgacctgaaatcacatgtgggctgcaccctcctgggttatcttgagcaacatgt 70
Query: 60 gttctcaggtcgcccctg 77
||||||||||||||||||
Sbjct: 71 gttctcaggtcgcccctg 88
>41801_bdi-MIR398c:mirbase
Length = 131
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 catgtgttctcaggtcgcccctg 77
|||||||||||||||||||||||
Sbjct: 85 catgtgttctcaggtcgcccctg 107
>41799_bdi-MIR398a:mirbase
Length = 150
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 catgtgttctcaggtcgcccctg 77
|||||||||||||||||||||||
Sbjct: 94 catgtgttctcaggtcgcccctg 116
>41667_vvi-MIR398c:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 catgtgttctcaggtcgcccctg 77
|||||||||||||||||||||||
Sbjct: 56 catgtgttctcaggtcgcccctg 78
>41666_vvi-MIR398b:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 catgtgttctcaggtcgcccctg 77
|||||||||||||||||||||||
Sbjct: 56 catgtgttctcaggtcgcccctg 78
>41446_ptc-MIR398b:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 catgtgttctcaggtcgcccctg 77
|||||||||||||||||||||||
Sbjct: 54 catgtgttctcaggtcgcccctg 76
>41191_aqc-MIR398b:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 catgtgttctcaggtcgcccctg 77
|||||||||||||||||||||||
Sbjct: 70 catgtgttctcaggtcgcccctg 92
>40729_mtr-MIR398b:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 catgtgttctcaggtcgcccctg 77
|||||||||||||||||||||||
Sbjct: 60 catgtgttctcaggtcgcccctg 82
>40382_rco-MIR398b:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 catgtgttctcaggtcgcccctg 77
|||||||||||||||||||||||
Sbjct: 99 catgtgttctcaggtcgcccctg 121
>41144_tcc-MIR398a:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 atgtgttctcaggtcgcccctg 77
||||||||||||||||||||||
Sbjct: 84 atgtgttctcaggtcgcccctg 105
>42818_zma-MIR398b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 catgtgttctcaggtcgcccc 75
|||||||||||||||||||||
Sbjct: 85 catgtgttctcaggtcgcccc 105
>42817_zma-MIR398a:mirbase
Length = 140
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 catgtgttctcaggtcgcccc 75
|||||||||||||||||||||
Sbjct: 117 catgtgttctcaggtcgcccc 137
>42645_tae-MIR398:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 catgtgttctcaggtcgcccc 75
|||||||||||||||||||||
Sbjct: 83 catgtgttctcaggtcgcccc 103
>42588_sbi-MIR398:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 catgtgttctcaggtcgcccc 75
|||||||||||||||||||||
Sbjct: 86 catgtgttctcaggtcgcccc 106
>42040_osa-MIR398b:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 tgtgttctcaggtcgcccctg 77
|||||||||||||||||||||
Sbjct: 58 tgtgttctcaggtcgcccctg 78
>40730_mtr-MIR398c:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 tgtgttctcaggtcgcccctg 77
|||||||||||||||||||||
Sbjct: 62 tgtgttctcaggtcgcccctg 82
>39882_aly-MIR398b:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 acatgtgttctcaggtcgcccctg 77
||||||||||||||||| ||||||
Sbjct: 88 acatgtgttctcaggtcacccctg 111
>40091_ath-MIR398c:mirbase
Length = 115
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 catgtgttctcaggtcgcccctg 77
|||||||||||||||| ||||||
Sbjct: 83 catgtgttctcaggtcacccctg 105
>40090_ath-MIR398b:mirbase
Length = 116
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 catgtgttctcaggtcgcccctg 77
|||||||||||||||| ||||||
Sbjct: 84 catgtgttctcaggtcacccctg 106
