miRNEST 2.0, an integrative microRNA resource :: BLAST
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 287 bits (145), Expect = 1e-78
Identities = 159/166 (95%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 71
Query: 61 tcccacagccctatcaccatcagtcattttgatgggcctgcggcttgcatatctcaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tcccacagccctatcaccatcagtcattttgatgggcctgcggcttgcatatctcaggag 131
Query: 121 ctttattacctaatgttagatcnnnnnnnggattgaagggagctct 166
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 132 ctttattacctaatgttagatctttttttggattgaagggagctct 177
>40338_rco-MIR159:mirbase
Length = 180
Score = 99.6 bits (50), Expect = 6e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 60
||||||||||||||||||||||| | || || ||||||||| |||||||||||||||| |
Sbjct: 5 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 64
Query: 61 tcccacagccctat 74
||||||||||||||
Sbjct: 65 tcccacagccctat 78
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 85.7 bits (43), Expect = 1e-17
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 60
||||||||||||||||||||||| | || | |||||||||| |||||||||| |||| |
Sbjct: 10 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 69
Query: 61 tcccacagccctatc 75
|||||||||||||||
Sbjct: 70 tcccacagccctatc 84
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 85.7 bits (43), Expect = 1e-17
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 99 tgcggcttgcatatctcaggagctttattacctaatgttagatcnnnnnnnggattgaag 158
||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 106 tgcggcttgcatatctcaggagctttattgcctaatgttagatccctttttggattgaag 165
Query: 159 ggagctct 166
||||||||
Sbjct: 166 ggagctct 173
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 85.7 bits (43), Expect = 1e-17
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 99 tgcggcttgcatatctcaggagctttattacctaatgttagatcnnnnnnnggattgaag 158
||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 106 tgcggcttgcatatctcaggagctttattgcctaatgttagatccctttttggattgaag 165
Query: 159 ggagctct 166
||||||||
Sbjct: 166 ggagctct 173
>40397_ahy-MIR159:mirbase
Length = 197
Score = 71.9 bits (36), Expect = 1e-13
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 60
||||||||||||||||||| ||| | || || ||||||||| |||||||| ||||||| |
Sbjct: 4 ggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgga 63
Query: 61 tcccacag 68
||||||||
Sbjct: 64 tcccacag 71
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 63.9 bits (32), Expect = 4e-11
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 60
|||||||||||||||||||| || | || | |||||| ||| |||||||| ||||||| |
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 tcccacag 68
||||||||
Sbjct: 63 tcccacag 70
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 63.9 bits (32), Expect = 4e-11
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 60
|||||||||||||||||||| || | || | |||||| ||| |||||||| ||||||| |
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 tcccacag 68
||||||||
Sbjct: 63 tcccacag 70
>40432_gma-MIR159a:mirbase
Length = 214
Score = 56.0 bits (28), Expect = 9e-09
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 60
|||||||||||||||||||| || | || | |||||| || |||||||| ||||||| |
Sbjct: 22 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 81
Query: 61 tcccacag 68
||||||||
Sbjct: 82 tcccacag 89
>41218_csi-MIR159:mirbase
Length = 216
Score = 54.0 bits (27), Expect = 3e-08
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagctcctgct-gggtagatcgagctgctgagctatga 59
||||||||||||||||||| ||| | || || ||||| || ||||||||||||||||
Sbjct: 13 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 72
Query: 60 atcccacagccctat 74
||||||||| |||||
Sbjct: 73 atcccacagtcctat 87
>39804_aly-MIR159a:mirbase
Length = 222
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 102 ggcttgcatatctcaggagcttta 125
||||||||||||||||||||||||
Sbjct: 131 ggcttgcatatctcaggagcttta 154
>40016_ath-MIR159a:mirbase
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 ttgcatatctcaggagcttta 125
|||||||||||||||||||||
Sbjct: 114 ttgcatatctcaggagcttta 134
>40311_bra-MIR159a:mirbase
Length = 185
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 102 ggcttgcatatctcaggagcttta 125
||||| ||||||||||||||||||
Sbjct: 111 ggcttacatatctcaggagcttta 134
>40261_bna-MIR159:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 102 ggcttgcatatctcaggagcttta 125
||||| ||||||||||||||||||
Sbjct: 109 ggcttacatatctcaggagcttta 132
