miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>41263_csi-MIR530b:mirbase
          Length = 154

 Score =  266 bits (134), Expect = 4e-72
 Identities = 134/134 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgcatttgcacctgcatcttgttgcgttatctggttctggttcgtaaaagccaaagcaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11  tgcatttgcacctgcatcttgttgcgttatctggttctggttcgtaaaagccaaagcaca 70

                                                                       
Query: 61  agaagagccaatagccgtcggcagatatggtggcagcatggggttatatgcatcaaggtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  agaagagccaatagccgtcggcagatatggtggcagcatggggttatatgcatcaaggtg 130

                         
Query: 121 cagttgcaagtgca 134
           ||||||||||||||
Sbjct: 131 cagttgcaagtgca 144




>41510_ptc-MIR530b:mirbase
          Length = 172

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tgcatttgcacctgcatctt 20
          ||||||||||||||||||||
Sbjct: 21 tgcatttgcacctgcatctt 40