miRNEST 2.0, an integrative microRNA resource :: BLAST
>40448_gma-MIR168:mirbase
Length = 125
Score = 111 bits (56), Expect = 8e-26
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaaccggtttctgcgcgaaatggtgaagtggtagccggcggc 60
|||||||||||||||||||||||||||| ||||| ||||| | || ||| ||||||| |
Sbjct: 19 tcgcttggtgcaggtcgggaaccggttttcgcgcggaatggaggagcggtcgccggcgcc 78
Query: 61 gaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||
Sbjct: 79 gaattggatcccgccttgcatcaactga 106
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 gcgaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||||
Sbjct: 123 gcgaattggatcccgccttgcatcaactga 152
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaac 32
>41215_crt-MIR168:mirbase
Length = 201
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 gcgaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||||
Sbjct: 132 gcgaattggatcccgccttgcatcaactga 161
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 21 tcgcttggtgcaggtcgggaac 42
>41210_ccl-MIR168:mirbase
Length = 176
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 gcgaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||||
Sbjct: 131 gcgaattggatcccgccttgcatcaactga 160
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 20 tcgcttggtgcaggtcgggaac 41
>41101_tcc-MIR168:mirbase
Length = 167
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 60 cgaattggatcccgccttgcatcaactga 88
|||||||||||||||||||||||||||||
Sbjct: 117 cgaattggatcccgccttgcatcaactga 145
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 21 tcgcttggtgcaggtcgggaac 42
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 61 gaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactga 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaac 32
>40355_rco-MIR168:mirbase
Length = 131
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 61 gaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||
Sbjct: 97 gaattggatcccgccttgcatcaactga 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 6 tcgcttggtgcaggtcgggaac 27
>40043_ath-MIR168a:mirbase
Length = 138
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 attggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactga 121
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaacc 23
|||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaacc 40
>39832_aly-MIR168a:mirbase
Length = 155
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 attggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactga 127
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaacc 23
|||||||||||||||||||||||
Sbjct: 24 tcgcttggtgcaggtcgggaacc 46
>41596_vvi-MIR168:mirbase
Length = 132
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaaccg 24
||||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaaccg 34
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 gatcccgccttgcatcaactga 88
||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactga 120
>40271_bna-MIR168:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaac 39
>40044_ath-MIR168b:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaac 40
>39833_aly-MIR168b:mirbase
Length = 176
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 43 tcgcttggtgcaggtcgggaac 64
