miRNEST 2.0, an integrative microRNA resource :: BLAST
>40334_rco-MIR156e:mirbase
Length = 95
Score = 81.8 bits (41), Expect = 7e-17
Identities = 76/85 (89%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaacccgccatt-ggccaaagagatcttcgccactgttgg 59
||||||||||| ||||||||||||||| |||| ||| |||||| |||| ||| ||||||
Sbjct: 5 ttgacagaagagagagagcacaacccggcattaggctaaagag-tctttgcctttgttgg 63
Query: 60 gagtgtgctctctcttcttctgtca 84
|||||||||||||| ||||||||||
Sbjct: 64 gagtgtgctctctcctcttctgtca 88
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 65.9 bits (33), Expect = 4e-12
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaacccgccattggccaaagaga-tcttcgccactgttgg 59
||||||||||| ||||||||||||||| ||| || ||||| | |||| || ||||||
Sbjct: 20 ttgacagaagagagagagcacaacccggcatcagctaaagaaagtctttgcttttgttgg 79
Query: 60 gagtgtgctctctcttcttctgtca 84
||||||||| |||||||||||||||
Sbjct: 80 gagtgtgctttctcttcttctgtca 104
>40430_gma-MIR156f:mirbase
Length = 106
Score = 63.9 bits (32), Expect = 2e-11
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaacccgccattggccaaagagatcttcgccactgttggg 60
||||||||||| ||||||||||||||| | ||| |||| |||| ||| |||||||
Sbjct: 11 ttgacagaagagagagagcacaacccgggaatggttaaaggagtctttgcctttgttggg 70
Query: 61 agtgtgctctctcttcttctgtca 84
|||||||||||||||| |||||||
Sbjct: 71 agtgtgctctctcttcctctgtca 94
>40426_gma-MIR156b:mirbase
Length = 120
Score = 63.9 bits (32), Expect = 2e-11
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaacccgccattggccaaagagatcttcgccactgttggg 60
||||||||||| ||||||||||||||| | |||| |||| |||| ||| |||||||
Sbjct: 20 ttgacagaagagagagagcacaacccgggaatggctaaaggagtctttgcctttgttggg 79
Query: 61 agtgtgctctctcttcttctgtca 84
||||||| |||||||| |||||||
Sbjct: 80 agtgtgccctctcttcctctgtca 103
>41561_vvi-MIR156a:mirbase
Length = 104
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 56 ttgggagtgtgctctctcttcttctgtca 84
|||||||||||||||||||||||||||||
Sbjct: 64 ttgggagtgtgctctctcttcttctgtca 92
>40009_ath-MIR156h:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaacc 25
|||||||||||||||||||||||||
Sbjct: 11 ttgacagaagaaagagagcacaacc 35
>39797_aly-MIR156h:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaacc 25
|||||||||||||||||||||||||
Sbjct: 7 ttgacagaagaaagagagcacaacc 31
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaacccg 27
||||||||||| |||||||||||||||
Sbjct: 21 ttgacagaagagagagagcacaacccg 47
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 tgttgggagtgtgctctctcttcttctgtca 84
||||||||||||||||||| ||||||||||
Sbjct: 75 tgttgggagtgtgctctctactcttctgtca 105
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaacccg 27
||||||||||| |||||||||||||||
Sbjct: 17 ttgacagaagagagagagcacaacccg 43
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 tgttgggagtgtgctctctcttcttctgtca 84
||||||||||||||||||| ||||||||||
Sbjct: 71 tgttgggagtgtgctctctactcttctgtca 101
>41914_osa-MIR156k:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 2 tgacagaagaaagagagcacaacccg 27
|||||||||| |||||||||||||||
Sbjct: 11 tgacagaagagagagagcacaacccg 36
>41204_aqc-MIR529:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaaccc 26
||||||||||| ||||||||||||||
Sbjct: 17 ttgacagaagagagagagcacaaccc 42
>39728_smo-MIR156c:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcaca 22
||||||||||||||||||||||
Sbjct: 11 ttgacagaagaaagagagcaca 32
>42687_zma-MIR156j:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 tgacagaagaaagagagcacaaccc 26
|||||||||| ||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>42488_sbi-MIR156d:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 tgacagaagaaagagagcacaaccc 26
|||||||||| ||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>40427_gma-MIR156c:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaacc 25
||||||||||| |||||||||||||
Sbjct: 146 ttgacagaagatagagagcacaacc 170
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaac 24
||||||||||| ||||||||||||
Sbjct: 11 ttgacagaagatagagagcacaac 34
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaac 24
||||||||||| ||||||||||||
Sbjct: 21 ttgacagaagatagagagcacaac 44
>40335_rco-MIR156f:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaac 24
||||||||||| ||||||||||||
Sbjct: 6 ttgacagaagatagagagcacaac 29
>39416_pta-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 tgacagaagaaagagagcacaacc 25
|||||||||| |||||||||||||
Sbjct: 3 tgacagaagatagagagcacaacc 26
>40431_gma-MIR156g:mirbase
Length = 118
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1 ttgacagaagaaagagagcacaa 23
||||||||||| |||||||||||
Sbjct: 107 ttgacagaagatagagagcacaa 85
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaa 23
||||||||||| |||||||||||
Sbjct: 23 ttgacagaagatagagagcacaa 45
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagaaagagagcacaa 23
||||||||||| |||||||||||
Sbjct: 23 ttgacagaagatagagagcacaa 45
>39755_smo-MIR1088:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 gacagaagaaagagagcac 21
|||||||||||||||||||
Sbjct: 15 gacagaagaaagagagcac 33
>39754_smo-MIR1088:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 gacagaagaaagagagcac 21
|||||||||||||||||||
Sbjct: 15 gacagaagaaagagagcac 33
