miRNEST 2.0, an integrative microRNA resource :: BLAST
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 155 bits (78), Expect = 5e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcttagtccatttagtattagatggcctttgtggatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccatttgcttagtccatttagtattagatggcctttgtggatg 61
Query: 61 gcgtgcgaggagccatgc 78
||||||||||||||||||
Sbjct: 62 gcgtgcgaggagccatgc 79
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 60.0 bits (30), Expect = 2e-10
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcttagtccatttagtattagatggcctttgtggatg 60
||||||||||||||||||||||||| || |||| || | | ||||||| |||||||
Sbjct: 22 gcctggctccctgtatgccatttgcaaagcccatcaagagtccggtggccttcgtggatg 81
Query: 61 gcgtgcgaggagccatgc 78
|| |||||||||||||||
Sbjct: 82 gcatgcgaggagccatgc 99
>40019_ath-MIR160a:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 6e-08
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcttagtccatttagtattagatggcctttgtggatg 60
||||||||||||||||||||| |||| || |||| |||| | |||| ||| |||||||
Sbjct: 5 gcctggctccctgtatgccatatgctgagcccatcgagta-tcgatgacctccgtggatg 63
Query: 61 gcgtgcgaggagccatgc 78
|||| ||||||||||||
Sbjct: 64 gcgtatgaggagccatgc 81
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgc 25
|||||||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccatttgc 36
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 44 gatggcctttgtggatggcgtgcgaggagccatgc 78
||||||||| ||||||||||| ||||||||||||
Sbjct: 55 gatggccttcgtggatggcgtatgaggagccatgc 89
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgc 25
|||||||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccatttgc 36
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 ggatggcgtgcgaggagccatgc 78
|||||||||||||||||||||||
Sbjct: 67 ggatggcgtgcgaggagccatgc 89
>41529_sly-MIR160a:mirbase
Length = 129
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgc 25
|||||||||||||||||||||||||
Sbjct: 21 gcctggctccctgtatgccatttgc 45
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgc 25
|||||||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccatttgc 36
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgc 25
|||||||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccatttgc 36
Score = 38.2 bits (19), Expect = 9e-04
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 44 gatggcctttgtggatggcgtgcgaggagccatgc 78
|||||||| ||||||||||| ||||||||||||
Sbjct: 55 gatggcctccgtggatggcgtatgaggagccatgc 89
>41219_csi-MIR160:mirbase
Length = 143
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgc 25
|||||||||||||||||||||||||
Sbjct: 34 gcctggctccctgtatgccatttgc 58
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttg 24
||||||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgccatttg 30
>40658_mtr-MIR160:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttg 24
||||||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgccatttg 45
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 atggcgtgcgaggagccatgc 78
|||||||||||||||||||||
Sbjct: 79 atggcgtgcgaggagccatgc 99
>40436_gma-MIR160:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttg 24
||||||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgccatttg 45
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 49 cctttgtggatggcgtgcgaggagcca 75
|||||||||||||||| |||||||||
Sbjct: 70 cctttgtggatggcgtatgaggagcca 96
>40339_rco-MIR160a:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttg 24
||||||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgccatttg 30
>39807_aly-MIR160a:mirbase
Length = 158
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgct 26
||||||||||||||||||||| ||||
Sbjct: 43 gcctggctccctgtatgccatatgct 68
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcttag 29
|||||||||||||||||||| | ||||||
Sbjct: 2 gcctggctccctgtatgccactcgcttag 30
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 ggatggcgtgcgaggagcca 75
||||||||||||||||||||
Sbjct: 77 ggatggcgtgcgaggagcca 96
>41312_ptc-MIR160h:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgc 25
||||||||||||| |||||||||||
Sbjct: 12 gcctggctccctgcatgccatttgc 36
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgccat 27
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 49 cctttgtggatggcgtgcgaggagcca 75
|||||||||||||||| |||||||||
Sbjct: 55 cctttgtggatggcgtatgaggagcca 81
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgccat 27
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 49 cctttgtggatggcgtgcgaggagcca 75
|||||||||||||||| |||||||||
Sbjct: 55 cctttgtggatggcgtatgaggagcca 81
>40312_bra-MIR160a:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 27 gcctggctccctgtatgccat 47
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccat 32
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgc 25
|||||||||||||||||||| ||||
Sbjct: 31 gcctggctccctgtatgccacttgc 55
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 21 gcctggctccctgtatgccat 41
>42707_zma-MIR160g:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 3 gcctggctccctgtatgcca 22
>42705_zma-MIR160e:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 10 gcctggctccctgtatgcca 29
>42704_zma-MIR160d:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgcca 41
>42703_zma-MIR160c:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 8 gcctggctccctgtatgcca 27
>42702_zma-MIR160b:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgcca 41
>42701_zma-MIR160a:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 11 gcctggctccctgtatgcca 30
>42677_ttu-MIR160:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 10 gcctggctccctgtatgcca 29
>42636_tae-MIR160:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 23 gcctggctccctgtatgcca 42
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 ggatggcgtgcgaggagcca 75
||||||||||||||||||||
Sbjct: 88 ggatggcgtgcgaggagcca 107
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>41926_osa-MIR160d:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 9 gcctggctccctgtatgcca 28
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 ggatggcgtgcgaggagcca 75
||||||||||||||||||||
Sbjct: 114 ggatggcgtgcgaggagcca 133
>41925_osa-MIR160c:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 8 gcctggctccctgtatgcca 27
>41924_osa-MIR160b:mirbase
Length = 139
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>41923_osa-MIR160a:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgcca 24
>41869_far-MIR160:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 54 gcctggctccctgtatgcca 73
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 32 gcctggctccctgtatgcca 51
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 32 gcctggctccctgtatgcca 51
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 32 gcctggctccctgtatgcca 51
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 33 gcctggctccctgtatgcca 52
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 ggatggcgtgcgaggagcca 75
||||||||||||||||||||
Sbjct: 119 ggatggcgtgcgaggagcca 138
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>40340_rco-MIR160b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgcca 26
>40021_ath-MIR160c:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgcca 25
>40020_ath-MIR160b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgcca 25
>39809_aly-MIR160c:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 25 gcctggctccctgtatgcca 44
>39808_aly-MIR160b:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgcca 41
>39732_smo-MIR160b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 14 gcctggctccctgtatgcca 33
>39463_ppt-MIR160i:mirbase
Length = 139
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>39456_ppt-MIR160b:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>39374_pab-MIR160a:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 15 gcctggctccctgtatgcca 34
