miRNEST 2.0, an integrative microRNA resource :: BLAST
>40260_bna-MIR156c:mirbase
Length = 155
Score = 147 bits (74), Expect = 3e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 69 ggatataaggaaattcaagaaagagaggaaaaaagagcctgcatctctactcttttgtgc 128
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 ggatataaggaaattcaagaaagagaggaaaaaagagcctgcatctttactcttttgtgc 120
Query: 129 tctctatacttctgtcaa 146
||||||||||||||||||
Sbjct: 121 tctctatacttctgtcaa 138
Score = 83.8 bits (42), Expect = 3e-17
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgcaagtaca 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 ttgacagaagatagagagcactaaggatgacatgcaagtaca 59
>40012_ath-MIR157c:mirbase
Length = 217
Score = 135 bits (68), Expect = 1e-32
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 ttgacagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcaca 83
Query: 61 ccgcaagtggat 72
||||| ||||||
Sbjct: 84 ccgcatgtggat 95
>40310_bra-MIR157a:mirbase
Length = 149
Score = 103 bits (52), Expect = 4e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcaca 60
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 14 ttgacagaagatagagagcactaaggatgacatgcaagtacatatgtatgtatcatcaca 73
Query: 61 ccgc 64
||||
Sbjct: 74 ccgc 77
Score = 71.9 bits (36), Expect = 1e-13
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 98 aaaaagagcctgcatctctactcttttgtgctctctatacttctgtca 145
||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 92 aaaaatagcctgcatgtctactctttcgtgctctctatacttctgtca 139
>40259_bna-MIR156b:mirbase
Length = 208
Score = 103 bits (52), Expect = 4e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcaca 60
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 25 ttgacagaagatagagagcactaaggatgacatgcaagtacatatgtatgtatcatcaca 84
Query: 61 ccgc 64
||||
Sbjct: 85 ccgc 88
>39800_aly-MIR157c:mirbase
Length = 293
Score = 97.6 bits (49), Expect = 2e-21
Identities = 67/72 (93%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcaca 60
|||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 55 ttgacagaagatagagagcactaaggatgacatgcaagcacatac--atatatcatcaca 112
Query: 61 ccgcaagtggat 72
|| || ||||||
Sbjct: 113 ccccatgtggat 124
Score = 83.8 bits (42), Expect = 3e-17
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 100 aaagagcctgcatctctactcttttgtgctctctatacttctgtca 145
|||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 194 aaagagactgcatctctactcttttgtgctctctatacttctgtca 239
>40304_bol-MIR157a:mirbase
Length = 106
Score = 83.8 bits (42), Expect = 3e-17
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgcaagtaca 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcactaaggatgacatgcaagtaca 47
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 109 gcatctctactcttttgtgctctctatacttctgtcaa 146
|||||| |||||||||||||||||||||||||||||||
Sbjct: 65 gcatctttactcttttgtgctctctatacttctgtcaa 102
>39801_aly-MIR157d:mirbase
Length = 256
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcactaaggatgacatgcaa 37
||||||||||||||||||||||||||||| ||||||
Sbjct: 38 tgacagaagatagagagcactaaggatgatatgcaa 73
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 107 ctgcatctctactcttttgtgctctctatacttctgtca 145
||||||||||| || | |||||||||||| |||||||||
Sbjct: 173 ctgcatctctattcctatgtgctctctatgcttctgtca 211
>40654_mtr-MIR156g:mirbase
Length = 120
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgca 36
|||||||||||||||| ||||||||||||| |||||
Sbjct: 6 ttgacagaagatagagggcactaaggatgatatgca 41
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 122 tttgtgctctctatacttctgtca 145
||||||||||||| ||||||||||
Sbjct: 92 tttgtgctctctagacttctgtca 115
>40013_ath-MIR157d:mirbase
Length = 221
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcactaaggatg 29
||||||||||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcactaaggatg 51
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 107 ctgcatctctactcttttgtgctctctatacttctgtca 145
||||||||||| || | |||||||||||| |||||||||
Sbjct: 155 ctgcatctctattcctatgtgctctctatgcttctgtca 193
>41525_sly-MIR156a:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgc 35
|||||||||||||||||||||||| ||||| ||||
Sbjct: 1 ttgacagaagatagagagcactaatgatgatatgc 35
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 109 gcatctctactcttttgtgctctctatacttctgtca 145
||||||| | || |||||||||||||| |||||||||
Sbjct: 63 gcatctcaattcatttgtgctctctatgcttctgtca 99
>40428_gma-MIR156d:mirbase
Length = 151
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 116 tactcttttgtgctctctatacttctgtca 145
||||| ||||||||||||||||||||||||
Sbjct: 102 tactcctttgtgctctctatacttctgtca 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcac 41
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgca 36
|||||||||||||||||||||| | ||||| |||||
Sbjct: 11 ttgacagaagatagagagcactgacgatgaaatgca 46
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 2e-06
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 102 agagcctgcatctctactcttttgtgctctctatacttctgtca 145
|||| ||||||||| |||| |||||||||||||| |||||||||
Sbjct: 39 agagtctgcatctc-actcctttgtgctctctatgcttctgtca 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>40429_gma-MIR156e:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgca 36
|||||||||||||||||||||| | ||||| |||||
Sbjct: 21 ttgacagaagatagagagcactgatgatgaaatgca 56
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgca 36
||||||||||||||||||||| || ||||| |||||
Sbjct: 23 ttgacagaagatagagagcacaaaagatgatatgca 58
Score = 40.1 bits (20), Expect = 4e-04
Identities = 27/28 (96%), Gaps = 1/28 (3%)
Strand = Plus / Minus
Query: 119 tcttttgtgctctctatacttctgtcaa 146
||||||||||||||||| ||||||||||
Sbjct: 49 tcttttgtgctctctat-cttctgtcaa 23
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgca 36
||||||||||||||||||||| || ||||| |||||
Sbjct: 23 ttgacagaagatagagagcacaaaagatgatatgca 58
Score = 40.1 bits (20), Expect = 4e-04
Identities = 27/28 (96%), Gaps = 1/28 (3%)
Strand = Plus / Minus
Query: 119 tcttttgtgctctctatacttctgtcaa 146
||||||||||||||||| ||||||||||
Sbjct: 49 tcttttgtgctctctat-cttctgtcaa 23
>40336_rco-MIR156g:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgca 36
|||||||||||||||||||||| | ||||| |||||
Sbjct: 6 ttgacagaagatagagagcactgacgatgaaatgca 41
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 7e-06
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 103 gagcctgcatctctactcttttgtgctctctatacttctgtca 145
||||| ||||||| |||| |||||||||||||| |||||||||
Sbjct: 49 gagccagcatctc-actcctttgtgctctctattcttctgtca 90
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgcaag 38
||||||||||||||||||||| | ||||| |||||||
Sbjct: 11 ttgacagaagatagagagcacagatgatgaaatgcaag 48
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 7e-06
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 103 gagcctgcatctctactcttttgtgctctctatacttctgtca 145
|||||||||| || |||| |||||||||||||| |||||||||
Sbjct: 59 gagcctgcatttc-actcctttgtgctctctattcttctgtca 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcac 41
>40337_rco-MIR156h:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 7e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 107 ctgcatctctactcttttgtgctctctatacttctgtca 145
||||||||| |||| |||||||||||||| |||||||||
Sbjct: 52 ctgcatctc-actcctttgtgctctctatgcttctgtca 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 108 tgcatctctactcttttgtgctctctatacttctgtca 145
|||||||| |||| ||||||||||||| ||||||||||
Sbjct: 54 tgcatctc-actcctttgtgctctctagacttctgtca 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
>41527_sly-MIR156c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>41526_sly-MIR156b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 117 actcttttgtgctctctatacttctgtca 145
|||| |||||||||||||| |||||||||
Sbjct: 63 actcctttgtgctctctatgcttctgtca 91
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcac 41
>41077_gra-MIR157b:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 5 ttgacagaagatagagagcac 25
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 117 actcttttgtgctctctatacttctgtca 145
|||| |||||||||||||| |||||||||
Sbjct: 58 actcctttgtgctctctatgcttctgtca 86
>41076_gra-MIR157a:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 5 ttgacagaagatagagagcac 25
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 117 actcttttgtgctctctatacttctgtca 145
|||| |||||||||||||| |||||||||
Sbjct: 139 actcctttgtgctctctatgcttctgtca 167
>40431_gma-MIR156g:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 24 ttgacagaagatagagagcac 44
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 107 ttgacagaagatagagagcac 87
>40427_gma-MIR156c:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 146 ttgacagaagatagagagcac 166
>40335_rco-MIR156f:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
>40011_ath-MIR157b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 19 ttgacagaagatagagagcac 39
>40010_ath-MIR157a:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 4 ttgacagaagatagagagcac 24
>39799_aly-MIR157b:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 4 ttgacagaagatagagagcac 24
>39798_aly-MIR157a:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 16 ttgacagaagatagagagcac 36
>41162_aqc-MIR156a:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 122 tttgtgctctctatacttctgtca 145
|||||||||||||| |||||||||
Sbjct: 56 tttgtgctctctatgcttctgtca 79
>39727_smo-MIR156b:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>39416_pta-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>39415_pta-MIR156a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
