miRNEST 2.0, an integrative microRNA resource :: BLAST
>41118_tcc-MIR171c:mirbase
Length = 123
Score = 153 bits (77), Expect = 2e-38
Identities = 86/89 (96%)
Strand = Plus / Plus
Query: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 17 gcgatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcgtaaaatac 76
Query: 61 gatctcagattgagccgcgccaatatcac 89
|||||||||||||||||||||||||||||
Sbjct: 77 gatctcagattgagccgcgccaatatcac 105
>40699_mtr-MIR171e:mirbase
Length = 93
Score = 115 bits (58), Expect = 5e-27
Identities = 82/89 (92%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
||||||||||||||||||||||||||||||||||||| || || ||| |||||||||
Sbjct: 4 gcgatgttggtgaggttcaatccgaagacggatttac--atgtatagagttgtaaaatac 61
Query: 61 gatctcagattgagccgcgccaatatcac 89
|||||||||||||||||||||||||||||
Sbjct: 62 gatctcagattgagccgcgccaatatcac 90
>41383_ptc-MIR171c:mirbase
Length = 104
Score = 97.6 bits (49), Expect = 1e-21
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
||||||||||||||||||||||||||||||||||||| | | | | |||||||||
Sbjct: 9 gcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaatac 68
Query: 61 gatctcagattgagccgcgccaatatcac 89
|||||||||||||||||||||||||||||
Sbjct: 69 gatctcagattgagccgcgccaatatcac 97
>40365_rco-MIR171g:mirbase
Length = 89
Score = 95.6 bits (48), Expect = 5e-21
Identities = 79/89 (88%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
||||||||||||||||||||||||||||||||||||| |||| || ||||| ||
Sbjct: 2 gcgatgttggtgaggttcaatccgaagacggatttac----acattctgttgtaaaggac 57
Query: 61 gatctcagattgagccgcgccaatatcac 89
|||||||||||||||||||||||||||||
Sbjct: 58 gatctcagattgagccgcgccaatatcac 86
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 91.7 bits (46), Expect = 8e-20
Identities = 78/89 (87%), Gaps = 6/89 (6%)
Strand = Plus / Plus
Query: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
|||||||||||||||||||||||||||||||||||||||| || |||||| ||
Sbjct: 10 gcgatgttggtgaggttcaatccgaagacggatttacgaa------gagccgtaaagaac 63
Query: 61 gatctcagattgagccgcgccaatatcac 89
|||||| ||||||||||||||||||||||
Sbjct: 64 gatctctgattgagccgcgccaatatcac 92
>41541_sly-MIR171d:mirbase
Length = 112
Score = 77.8 bits (39), Expect = 1e-15
Identities = 78/89 (87%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
|||||||||||||||||||||||||||||| ||||| | | ||| ||||||| ||
Sbjct: 10 gcgatgttggtgaggttcaatccgaagacgaatttatg--cttatt--ttcgtaaagaac 65
Query: 61 gatctcagattgagccgcgccaatatcac 89
|||||||||||||||||||||||||||||
Sbjct: 66 gatctcagattgagccgcgccaatatcac 94
>41384_ptc-MIR171d:mirbase
Length = 100
Score = 69.9 bits (35), Expect = 3e-13
Identities = 77/89 (86%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
||||||||||||||||||||||||||||| ||||||| || | | ||||||| |
Sbjct: 9 gcgatgttggtgaggttcaatccgaagacagatttacac---gagtgaaa-gtaaaatcc 64
Query: 61 gatctcagattgagccgcgccaatatcac 89
|||||||||||||||||||||||||||||
Sbjct: 65 gatctcagattgagccgcgccaatatcac 93
>41627_vvi-MIR171f:mirbase
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 61 gatctcagattgagccgcgccaatatcac 89
|||||||||||||||||||||||||||||
Sbjct: 64 gatctcagattgagccgcgccaatatcac 92
>39479_ppt-MIR171b:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 64 ctcagattgagccgcgccaatatcac 89
||||||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatcac 86
>41117_tcc-MIR171b:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 65 tcagattgagccgcgccaatatcac 89
|||||||||||||||||||||||||
Sbjct: 78 tcagattgagccgcgccaatatcac 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 gcgatgttggtgaggttcaatccgaaga 28
|||||||||||||||||||||| |||||
Sbjct: 19 gcgatgttggtgaggttcaatctgaaga 46
>39478_ppt-MIR171a:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 65 tcagattgagccgcgccaatatcac 89
|||||||||||||||||||||||||
Sbjct: 61 tcagattgagccgcgccaatatcac 85
>39739_smo-MIR171d:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 63 tctcagattgagccgcgccaatatcac 89
||||| |||||||||||||||||||||
Sbjct: 65 tctcaaattgagccgcgccaatatcac 91
>42555_sbi-MIR171j:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatcac 89
||||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatcac 105
>41540_sly-MIR171c:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatcac 89
||||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatcac 100
>41231_csi-MIR171a:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatcac 89
||||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatcac 89
>41211_ccl-MIR171:mirbase
Length = 321
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatcac 89
||||||||||||||||||||||
Sbjct: 123 gattgagccgcgccaatatcac 144
>41981_osa-MIR171a:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gcgatgttggtgaggttcaatccga 25
||||| |||||||||||||||||||
Sbjct: 8 gcgatattggtgaggttcaatccga 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
>42774_zma-MIR171n:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>42761_zma-MIR171a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 51 gattgagccgcgccaatatc 70
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>40322_bra-MIR171e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40291_bna-MIR171g:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>40290_bna-MIR171f:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40060_ath-MIR171a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 89 gattgagccgcgccaatatc 108
>39849_aly-MIR171a:mirbase
Length = 198
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 gattgagccgcgccaatatc 87
||||||||||||||||||||
Sbjct: 131 gattgagccgcgccaatatc 150
