miRNEST 2.0, an integrative microRNA resource :: BLAST
>40291_bna-MIR171g:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 50 tctcttagatatctgattgagccgcgtcaatatc 83
|||||||| ||||||||||||||||| |||||||
Sbjct: 45 tctcttagttatctgattgagccgcgccaatatc 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcagat 24
||||||||||||||||| ||||||
Sbjct: 1 gatattggcctggttcactcagat 24
>39849_aly-MIR171a:mirbase
Length = 198
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcagatcttccc 30
||||||||||||||||| ||||||||||||
Sbjct: 57 gatattggcctggttcactcagatcttccc 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 tatctgattgagccgcgtcaatatc 83
||||||||||||||||| |||||||
Sbjct: 126 tatctgattgagccgcgccaatatc 150
>40322_bra-MIR171e:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcagatcttcc 29
||||||||||||||||| |||||||||||
Sbjct: 18 gatattggcctggttcactcagatcttcc 46
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 50 tctcttagatatctgattgagccgcgtcaatatc 83
||||| || ||||||||||||||||| |||||||
Sbjct: 71 tctctcagttatctgattgagccgcgccaatatc 104
>40290_bna-MIR171f:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcagatcttcc 29
||||||||||||||||| |||||||||||
Sbjct: 18 gatattggcctggttcactcagatcttcc 46
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 50 tctcttagatatctgattgagccgcgtcaatatc 83
||||| || ||||||||||||||||| |||||||
Sbjct: 71 tctctcagttatctgattgagccgcgccaatatc 104
>40060_ath-MIR171a:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcagatctt 27
||||||||||||||||| |||||||||
Sbjct: 17 gatattggcctggttcactcagatctt 43
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 tatctgattgagccgcgtcaatatc 83
||||||||||||||||| |||||||
Sbjct: 84 tatctgattgagccgcgccaatatc 108
>42774_zma-MIR171n:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 tatctgattgagccgcgtcaatatc 83
||||||||||||||||| |||||||
Sbjct: 53 tatctgattgagccgcgccaatatc 77
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 tatctgattgagccgcgtcaatatc 83
||||||||||||||||| |||||||
Sbjct: 53 tatctgattgagccgcgccaatatc 77
>41981_osa-MIR171a:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 tatctgattgagccgcgtcaatatc 83
||||||||||||||||| |||||||
Sbjct: 63 tatctgattgagccgcgccaatatc 87
>41623_vvi-MIR171b:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 63 tgattgagccgcgtcaatatc 83
|||||||||||||||||||||
Sbjct: 69 tgattgagccgcgtcaatatc 89
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcagatc 25
||||||||||||||||| |||||||
Sbjct: 11 gatattggcctggttcactcagatc 35
>40696_mtr-MIR171b:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 63 tgattgagccgcgtcaatatc 83
|||||||||||||||||||||
Sbjct: 69 tgattgagccgcgtcaatatc 89
>42773_zma-MIR171m:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 gattgagccgcgtcaatatc 83
||||||||||||||||||||
Sbjct: 62 gattgagccgcgtcaatatc 81
>42772_zma-MIR171l:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 gattgagccgcgtcaatatc 83
||||||||||||||||||||
Sbjct: 58 gattgagccgcgtcaatatc 77
>42553_sbi-MIR171h:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 gattgagccgcgtcaatatc 83
||||||||||||||||||||
Sbjct: 60 gattgagccgcgtcaatatc 79
>41989_osa-MIR171i:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 gattgagccgcgtcaatatc 83
||||||||||||||||||||
Sbjct: 89 gattgagccgcgtcaatatc 108
>40059_ath-MIR170:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcagat 24
||||||||||||||||| ||||||
Sbjct: 16 gatattggcctggttcactcagat 39
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 60 atctgattgagccgcgtcaatatc 83
|||||||||||||| |||||||||
Sbjct: 56 atctgattgagccgtgtcaatatc 79
>39848_aly-MIR170:mirbase
Length = 212
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcagat 24
||||||||||||||||| ||||||
Sbjct: 75 gatattggcctggttcactcagat 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 60 atctgattgagccgcgtcaatatc 83
|||||||||||||| |||||||||
Sbjct: 114 atctgattgagccgtgtcaatatc 137
>42761_zma-MIR171a:mirbase
Length = 99
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 61 tctgattgagccgcgtcaatatc 83
||||||||||||||| |||||||
Sbjct: 77 tctgattgagccgcgccaatatc 99
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 61 tctgattgagccgcgtcaatatc 83
||||||||||||||| |||||||
Sbjct: 68 tctgattgagccgcgccaatatc 90
>41538_sly-MIR171a:mirbase
Length = 122
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcaga 23
||||||||||||||||| |||||
Sbjct: 16 gatattggcctggttcactcaga 38
>41281_ctr-MIR171:mirbase
Length = 371
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 attgagccgcgtcaatatc 83
|||||||||||||||||||
Sbjct: 103 attgagccgcgtcaatatc 121
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcaga 23
||||||||||||||||| |||||
Sbjct: 21 gatattggcctggttcactcaga 43
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcaga 23
||||||||||||||||| |||||
Sbjct: 6 gatattggcctggttcactcaga 28
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcaga 23
||||||||||||||||| |||||
Sbjct: 6 gatattggcctggttcactcaga 28
>40364_rco-MIR171f:mirbase
Length = 111
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gatattggcctggttcattcaga 23
||||||||||||||||| |||||
Sbjct: 4 gatattggcctggttcactcaga 26
