miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41630_vvi-MIR171i:mirbase
          Length = 103

 Score = 95.6 bits (48), Expect = 4e-21
 Identities = 72/79 (91%), Gaps = 2/79 (2%)
 Strand = Plus / Plus

                                                                      
Query: 3  gatgttggaacggctcaatcaaatcaaatctcccaa--gaattgggtcctttagtttgat 60
          |||||||||| |||||||||||||||||||||||||  |  |||||||||||| | ||||
Sbjct: 13 gatgttggaatggctcaatcaaatcaaatctcccaagggttttgggtcctttaatctgat 72

                             
Query: 61 tgagccgtgccaatatcat 79
          |||||||||||||||||||
Sbjct: 73 tgagccgtgccaatatcat 91




>40363_rco-MIR171e:mirbase
          Length = 84

 Score = 95.6 bits (48), Expect = 4e-21
 Identities = 70/76 (92%), Gaps = 1/76 (1%)
 Strand = Plus / Plus

                                                                      
Query: 3  gatgttggaacggctcaatcaaatcaaatctccc-aagaattgggtcctttagtttgatt 61
          |||||||||| ||||||||||||||||||||||| |||  |||||||||||| | |||||
Sbjct: 4  gatgttggaatggctcaatcaaatcaaatctcccaaagttttgggtcctttaatctgatt 63

                          
Query: 62 gagccgtgccaatatc 77
          ||||||||||||||||
Sbjct: 64 gagccgtgccaatatc 79




>41178_aqc-MIR171b:mirbase
          Length = 77

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                      
Query: 5  tgttggaacggctcaatcaaatcaaatctcccaagaattgggtcctttagtttgattgag 64
          |||||||| ||||||||||||| ||| ||| |||  ||||||||||||| | ||||||||
Sbjct: 3  tgttggaatggctcaatcaaatgaaagctctcaaagattgggtcctttaatctgattgag 62

                        
Query: 65 ccgtgccaatatca 78
          ||||||||||||||
Sbjct: 63 ccgtgccaatatca 76




>41121_tcc-MIR171f:mirbase
          Length = 117

 Score = 77.8 bits (39), Expect = 1e-15
 Identities = 70/80 (87%), Gaps = 4/80 (5%)
 Strand = Plus / Plus

                                                                      
Query: 3  gatgttggaacggctcaatcaaatcaaatctcccaagaat----tgggtcctttagtttg 58
          |||||||||| ||||||||||||||||||||||||||  |    |||||  |||| ||||
Sbjct: 19 gatgttggaatggctcaatcaaatcaaatctcccaagctttttatgggtgttttaatttg 78

                              
Query: 59 attgagccgtgccaatatca 78
          ||||||||||||||||||||
Sbjct: 79 attgagccgtgccaatatca 98




>41622_vvi-MIR171a:mirbase
          Length = 99

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                      
Query: 2  tgatgttggaacggctcaatcaaatcaaatctcccaagaattgggtcctttagtttgatt 61
          ||||||||| |||||||||||||| ||||  || |||   ||| |||||||| | |||||
Sbjct: 13 tgatgttgggacggctcaatcaaaccaaagatctcaatggttgagtcctttaatctgatt 72

                            
Query: 62 gagccgtgccaatatcat 79
          ||||||||||||||||||
Sbjct: 73 gagccgtgccaatatcat 90




>41122_tcc-MIR171g:mirbase
          Length = 115

 Score = 58.0 bits (29), Expect = 9e-10
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 46 gtcctttagtttgattgagccgtgccaatatca 78
          |||||||||| ||||||||||||||||||||||
Sbjct: 64 gtcctttagtctgattgagccgtgccaatatca 96




>41388_ptc-MIR171h:mirbase
          Length = 100

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 69/82 (84%), Gaps = 6/82 (7%)
 Strand = Plus / Plus

                                                                      
Query: 3  gatgttggaacggctcaatcaaatcaaatctcccaa-----gaa-ttgggtcctttagtt 56
          |||||||| | |||||||||| ||||||||||||||     ||  ||||||| |||| | 
Sbjct: 11 gatgttgggatggctcaatcatatcaaatctcccaaactatgatgttgggtcgtttaatc 70

                                
Query: 57 tgattgagccgtgccaatatca 78
          ||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatca 92




>42546_sbi-MIR171a:mirbase
          Length = 161

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 54  gtttgattgagccgtgccaatatca 78
           |||||||||||||||||||||||||
Sbjct: 119 gtttgattgagccgtgccaatatca 143




>41625_vvi-MIR171d:mirbase
          Length = 100

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 54 gtttgattgagccgtgccaatatca 78
          |||||||||||||||||||||||||
Sbjct: 64 gtttgattgagccgtgccaatatca 88




>41387_ptc-MIR171g:mirbase
          Length = 100

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                               
Query: 42 ttgggtcctttagtttgattgagccgtgccaatatca 78
          ||||||| |||| | ||||||||||||||||||||||
Sbjct: 56 ttgggtcttttaatctgattgagccgtgccaatatca 92




>41382_ptc-MIR171b:mirbase
          Length = 103

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 54 gtttgattgagccgtgccaatatca 78
          |||||||||||||||||||||||||
Sbjct: 68 gtttgattgagccgtgccaatatca 92




>41381_ptc-MIR171a:mirbase
          Length = 104

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 54 gtttgattgagccgtgccaatatca 78
          |||||||||||||||||||||||||
Sbjct: 69 gtttgattgagccgtgccaatatca 93




>40360_rco-MIR171b:mirbase
          Length = 91

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 54 gtttgattgagccgtgccaatatca 78
          |||||||||||||||||||||||||
Sbjct: 60 gtttgattgagccgtgccaatatca 84




>40318_bra-MIR171a:mirbase
          Length = 85

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 54 gtttgattgagccgtgccaatatca 78
          |||||||||||||||||||||||||
Sbjct: 59 gtttgattgagccgtgccaatatca 83




>40305_bol-MIR171a:mirbase
          Length = 96

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 54 gtttgattgagccgtgccaatatca 78
          |||||||||||||||||||||||||
Sbjct: 65 gtttgattgagccgtgccaatatca 89




>40289_bna-MIR171e:mirbase
          Length = 92

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 54 gtttgattgagccgtgccaatatca 78
          |||||||||||||||||||||||||
Sbjct: 64 gtttgattgagccgtgccaatatca 88




>40288_bna-MIR171d:mirbase
          Length = 96

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 54 gtttgattgagccgtgccaatatca 78
          |||||||||||||||||||||||||
Sbjct: 65 gtttgattgagccgtgccaatatca 89




>39851_aly-MIR171c:mirbase
          Length = 111

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 54 gtttgattgagccgtgccaatatca 78
          |||||||||||||||||||||||||
Sbjct: 71 gtttgattgagccgtgccaatatca 95




>42762_zma-MIR171b:mirbase
          Length = 85

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 55 tttgattgagccgtgccaatatca 78
          ||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83




>42556_sbi-MIR171k:mirbase
          Length = 87

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 55 tttgattgagccgtgccaatatca 78
          ||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83




>41983_osa-MIR171c:mirbase
          Length = 99

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 55 tttgattgagccgtgccaatatca 78
          ||||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatca 90




>41982_osa-MIR171b:mirbase
          Length = 100

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 55 tttgattgagccgtgccaatatca 78
          ||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatca 91




>41766_bdi-MIR171c:mirbase
          Length = 86

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 55 tttgattgagccgtgccaatatca 78
          ||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85




>41624_vvi-MIR171c:mirbase
          Length = 103

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 55 tttgattgagccgtgccaatatca 78
          ||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatca 91




>41538_sly-MIR171a:mirbase
          Length = 122

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 54  gtttgattgagccgtgccaatatc 77
           ||||||||||||||||||||||||
Sbjct: 84  gtttgattgagccgtgccaatatc 107




>41385_ptc-MIR171e:mirbase
          Length = 94

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                      
Query: 2  tgatgttggaacggctcaatcaaatcaaatctcccaagaattgggtcctttagtttgatt 61
          ||||||||| |  |||||||||||||||| | | |||   |||||| ||||  | |||||
Sbjct: 10 tgatgttggcagagctcaatcaaatcaaagcactcaatggttgggttctttcatctgatt 69

                          
Query: 62 gagccgtgccaatatc 77
          ||||||||||||||||
Sbjct: 70 gagccgtgccaatatc 85




>41216_crt-MIR171:mirbase
          Length = 201

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 55  tttgattgagccgtgccaatatca 78
           ||||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatatca 182




>41181_aqc-MIR171e:mirbase
          Length = 102

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 54 gtttgattgagccgtgccaatatc 77
          ||||||||||||||||||||||||
Sbjct: 24 gtttgattgagccgtgccaatatc 1




>41177_aqc-MIR171a:mirbase
          Length = 102

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 54  gtttgattgagccgtgccaatatc 77
           ||||||||||||||||||||||||
Sbjct: 77  gtttgattgagccgtgccaatatc 100




>41119_tcc-MIR171d:mirbase
          Length = 117

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 55 tttgattgagccgtgccaatatca 78
          ||||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatca 98




>40701_mtr-MIR171g:mirbase
          Length = 105

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 54  gtttgattgagccgtgccaatatc 77
           ||||||||||||||||||||||||
Sbjct: 77  gtttgattgagccgtgccaatatc 100




>40700_mtr-MIR171f:mirbase
          Length = 95

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 55 tttgattgagccgtgccaatatca 78
          ||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatca 88




>40698_mtr-MIR171d:mirbase
          Length = 105

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 54  gtttgattgagccgtgccaatatc 77
           ||||||||||||||||||||||||
Sbjct: 77  gtttgattgagccgtgccaatatc 100




>40457_gma-MIR171c:mirbase
          Length = 104

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 55 tttgattgagccgtgccaatatca 78
          ||||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatca 93




>40359_rco-MIR171a:mirbase
          Length = 92

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 55 tttgattgagccgtgccaatatca 78
          ||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85




>40062_ath-MIR171c:mirbase
          Length = 116

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 55  tttgattgagccgtgccaatatca 78
           ||||||||||||||||||||||||
Sbjct: 85  tttgattgagccgtgccaatatca 108




>42769_zma-MIR171i:mirbase
          Length = 104

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 56 ttgattgagccgtgccaatatca 78
          |||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatca 86




>42766_zma-MIR171f:mirbase
          Length = 155

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 56  ttgattgagccgtgccaatatca 78
           |||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatca 136




>41389_ptc-MIR171i:mirbase
          Length = 129

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 55  tttgattgagccgtgccaatatc 77
           |||||||||||||||||||||||
Sbjct: 98  tttgattgagccgtgccaatatc 120



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 7   ttggaacggctcaatcaaatcaaa 30
           |||| |||||||||||||||||||
Sbjct: 116 ttggcacggctcaatcaaatcaaa 93




>41180_aqc-MIR171d:mirbase
          Length = 106

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 55  tttgattgagccgtgccaatatc 77
           |||||||||||||||||||||||
Sbjct: 82  tttgattgagccgtgccaatatc 104




>41120_tcc-MIR171e:mirbase
          Length = 161

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 55  tttgattgagccgtgccaatatc 77
           |||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatatc 141




>40695_mtr-MIR171:mirbase
          Length = 114

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 49 ctttagtttgattgagccgtgccaatatcat 79
          ||||||| |||||||| ||||||||||||||
Sbjct: 67 ctttagtctgattgagtcgtgccaatatcat 97




>40364_rco-MIR171f:mirbase
          Length = 111

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 55  tttgattgagccgtgccaatatc 77
           |||||||||||||||||||||||
Sbjct: 84  tttgattgagccgtgccaatatc 106




>40362_rco-MIR171d:mirbase
          Length = 124

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 55  tttgattgagccgtgccaatatc 77
           |||||||||||||||||||||||
Sbjct: 97  tttgattgagccgtgccaatatc 119




>42770_zma-MIR171j:mirbase
          Length = 129

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 57  tgattgagccgtgccaatatca 78
           ||||||||||||||||||||||
Sbjct: 90  tgattgagccgtgccaatatca 111




>42547_sbi-MIR171b:mirbase
          Length = 132

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 57  tgattgagccgtgccaatatca 78
           ||||||||||||||||||||||
Sbjct: 93  tgattgagccgtgccaatatca 114




>41986_osa-MIR171f:mirbase
          Length = 127

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 57  tgattgagccgtgccaatatca 78
           ||||||||||||||||||||||
Sbjct: 97  tgattgagccgtgccaatatca 118




>40697_mtr-MIR171c:mirbase
          Length = 105

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 55 tttgattgagccgtgccaatat 76
          ||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99




>42765_zma-MIR171e:mirbase
          Length = 126

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  tgattgagccgtgccaatatc 77
           |||||||||||||||||||||
Sbjct: 87  tgattgagccgtgccaatatc 107




>42764_zma-MIR171d:mirbase
          Length = 121

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  tgattgagccgtgccaatatc 77
           |||||||||||||||||||||
Sbjct: 82  tgattgagccgtgccaatatc 102




>42641_tae-MIR171b:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 58  gattgagccgtgccaatatca 78
           |||||||||||||||||||||
Sbjct: 90  gattgagccgtgccaatatca 110




>42640_tae-MIR171a:mirbase
          Length = 130

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  tgattgagccgtgccaatatc 77
           |||||||||||||||||||||
Sbjct: 89  tgattgagccgtgccaatatc 109




>42554_sbi-MIR171i:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 57 tgattgagccgtgccaatatc 77
          |||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88




>42549_sbi-MIR171d:mirbase
          Length = 153

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  tgattgagccgtgccaatatc 77
           |||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatatc 134




>41985_osa-MIR171e:mirbase
          Length = 119

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  tgattgagccgtgccaatatc 77
           |||||||||||||||||||||
Sbjct: 89  tgattgagccgtgccaatatc 109




>41984_osa-MIR171d:mirbase
          Length = 135

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  tgattgagccgtgccaatatc 77
           |||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatatc 125




>41890_hvu-MIR171:mirbase
          Length = 173

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  tgattgagccgtgccaatatc 77
           |||||||||||||||||||||
Sbjct: 112 tgattgagccgtgccaatatc 132




>41874_far-MIR171:mirbase
          Length = 130

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  tgattgagccgtgccaatatc 77
           |||||||||||||||||||||
Sbjct: 90  tgattgagccgtgccaatatc 110




>41765_bdi-MIR171b:mirbase
          Length = 164

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  tgattgagccgtgccaatatc 77
           |||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatatc 134




>41386_ptc-MIR171f:mirbase
          Length = 130

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  tgattgagccgtgccaatatc 77
           |||||||||||||||||||||
Sbjct: 101 tgattgagccgtgccaatatc 121