miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41056_ghr-MIR394b:mirbase
Length = 165
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctccattgatgtacttcttcttacctacccaacttataaaatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 ttggcattctgtccacctccattgatgtacttcttcttacctacccaacttataaaatga 94
Query: 61 tttgtctttgaagtaatggaggcggccagtatgtcaa 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 95 tttgtctttgaagtaatggaggcggccagtatgtcaa 131
>41645_vvi-MIR394c:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctccat 22
||||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctccat 32
>41643_vvi-MIR394a:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctccat 22
||||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctccat 32
>41422_ptc-MIR394a:mirbase
Length = 147
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctccat 22
||||||||||||||||||||||
Sbjct: 38 ttggcattctgtccacctccat 59
>41421_ptc-MIR394a:mirbase
Length = 147
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctccat 22
||||||||||||||||||||||
Sbjct: 38 ttggcattctgtccacctccat 59
>41135_tcc-MIR394b:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctccat 22
||||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctccat 42
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 77 tggaggcggccagtatgtcaa 97
|||||||||||||||||||||
Sbjct: 85 tggaggcggccagtatgtcaa 105
>40472_gma-MIR394b:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcca 21
|||||||||||||||||||||
Sbjct: 13 ttggcattctgtccacctcca 33
>40471_gma-MIR394a:mirbase
Length = 157
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcca 21
|||||||||||||||||||||
Sbjct: 39 ttggcattctgtccacctcca 59
>42790_zma-MIR394b:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>42789_zma-MIR394a:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>42569_sbi-MIR394b:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 2 ttggcattctgtccacctcc 21
>42568_sbi-MIR394a:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>42000_osa-MIR394:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33
>41776_bdi-MIR394:mirbase
Length = 200
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 53 ttggcattctgtccacctcc 72
>41644_vvi-MIR394b:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30
>41424_ptc-MIR394b:mirbase
Length = 147
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 38 ttggcattctgtccacctcc 57
>41423_ptc-MIR394b:mirbase
Length = 147
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 38 ttggcattctgtccacctcc 57
>41239_csi-MIR394:mirbase
Length = 147
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 17 ttggcattctgtccacctcc 36
>41134_tcc-MIR394a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>41055_ghr-MIR394a:mirbase
Length = 167
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 43 ttggcattctgtccacctcc 62
>40402_ahy-MIR394:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 22 ttggcattctgtccacctcc 41
>40078_ath-MIR394b:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33
>40077_ath-MIR394a:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33
>39868_aly-MIR394b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 41 ttggcattctgtccacctcc 60
>39867_aly-MIR394a:mirbase
Length = 220
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttggcattctgtccacctcc 20
||||||||||||||||||||
Sbjct: 68 ttggcattctgtccacctcc 87
