miRNEST 2.0, an integrative microRNA resource :: BLAST
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 73.8 bits (37), Expect = 4e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatgatatgcaa 37
|||||||||||||||||||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcacagatgatgatatgcaa 47
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 tttgtgctctctatgcttctgtca 162
||||||||||||||||||||||||
Sbjct: 68 tttgtgctctctatgcttctgtca 91
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatgatatgca 36
||||||||||||||||||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcacagatgatgatatgca 41
Score = 52.0 bits (26), Expect = 1e-07
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 125 tgcatttcactccatttgtgctctctatgcttctgtca 162
||||| ||||||| ||||||||||||||||||||||||
Sbjct: 131 tgcatatcactcc-tttgtgctctctatgcttctgtca 167
>40428_gma-MIR156d:mirbase
Length = 151
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatgatatgca 36
||||||||||||||||||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcacagatgatgatatgca 56
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 139 tttgtgctctctatgcttctgtca 162
|||||||||||||| |||||||||
Sbjct: 108 tttgtgctctctatacttctgtca 131
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcacagatgatgatatgca 36
|||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatgatatgca 35
Score = 52.0 bits (26), Expect = 1e-07
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 125 tgcatttcactccatttgtgctctctatgcttctgtca 162
||||| ||||||| ||||||||||||||||||||||||
Sbjct: 45 tgcatctcactcc-tttgtgctctctatgcttctgtca 81
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 65.9 bits (33), Expect = 9e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatgatatgcaa 37
|||||||||||||||||||||||||||||| ||||||
Sbjct: 11 ttgacagaagatagagagcacagatgatgaaatgcaa 47
Score = 42.1 bits (21), Expect = 1e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 126 gcatttcactccatttgtgctctctatgcttctgtca 162
|||| ||||||| |||||||||||||| |||||||||
Sbjct: 55 gcatctcactcc-tttgtgctctctattcttctgtca 90
>40337_rco-MIR156h:mirbase
Length = 97
Score = 65.9 bits (33), Expect = 9e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatgatatgcaa 37
||||||||||||||||||||||||||||||| |||||
Sbjct: 6 ttgacagaagatagagagcacagatgatgatgtgcaa 42
Score = 52.0 bits (26), Expect = 1e-07
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 125 tgcatttcactccatttgtgctctctatgcttctgtca 162
||||| ||||||| ||||||||||||||||||||||||
Sbjct: 53 tgcatctcactcc-tttgtgctctctatgcttctgtca 89
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatgatatgca 36
||||||||||||||||||||||||||||||| ||||
Sbjct: 11 ttgacagaagatagagagcacagatgatgatgtgca 46
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatgatatgca 36
|||||||||||||||||||||||||||||| |||||
Sbjct: 11 ttgacagaagatagagagcacagatgatgaaatgca 46
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatgatatgca 36
|||||||||||||||||||||||||||||| |||||
Sbjct: 21 ttgacagaagatagagagcacagatgatgagatgca 56
Score = 52.0 bits (26), Expect = 1e-07
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 125 tgcatttcactccatttgtgctctctatgcttctgtca 162
||||||||||||| |||||||||||||| |||||||||
Sbjct: 64 tgcatttcactcc-tttgtgctctctattcttctgtca 100
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatgatatgca 36
|||||||||||||||||||||||||||||| |||||
Sbjct: 6 ttgacagaagatagagagcacagatgatgaaatgca 41
>40010_ath-MIR157a:mirbase
Length = 98
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatga 30
||||||||||||||||||||||||||||||
Sbjct: 4 ttgacagaagatagagagcacagatgatga 33
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatg 29
|||||||||||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcacagatgatg 39
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 139 tttgtgctctctatgcttctg 159
|||||||||||||||||||||
Sbjct: 68 tttgtgctctctatgcttctg 88
>41077_gra-MIR157b:mirbase
Length = 91
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatg 29
|||||||||||||||||||||||||||||
Sbjct: 5 ttgacagaagatagagagcacagatgatg 33
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 tttgtgctctctatgcttctgtca 162
||||||||||||||||||||||||
Sbjct: 63 tttgtgctctctatgcttctgtca 86
>41076_gra-MIR157a:mirbase
Length = 101
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatg 29
|||||||||||||||||||||||||||||
Sbjct: 5 ttgacagaagatagagagcacagatgatg 33
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 139 tttgtgctctctatgcttctgtca 162
|||||||||| |||||||||||||
Sbjct: 73 tttgtgctctttatgcttctgtca 96
>40429_gma-MIR156e:mirbase
Length = 124
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatgatatgca 36
||||||||||||||||||||| |||||||| |||||
Sbjct: 21 ttgacagaagatagagagcactgatgatgaaatgca 56
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatgatatgca 36
|||||||||||||||||||||| | |||||||||||
Sbjct: 23 ttgacagaagatagagagcacaaaagatgatatgca 58
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 139 tttgtgctctctatgcttctgtca 162
||||||||||||| ||||||||||
Sbjct: 89 tttgtgctctctaagcttctgtca 112
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatgatatgca 36
|||||||||||||||||||||| | |||||||||||
Sbjct: 23 ttgacagaagatagagagcacaaaagatgatatgca 58
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 139 tttgtgctctctatgcttctgtca 162
||||||||||||| ||||||||||
Sbjct: 89 tttgtgctctctaagcttctgtca 112
>40011_ath-MIR157b:mirbase
Length = 132
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgat 28
||||||||||||||||||||||||||||
Sbjct: 19 ttgacagaagatagagagcacagatgat 46
>39798_aly-MIR157a:mirbase
Length = 123
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgat 28
||||||||||||||||||||||||||||
Sbjct: 16 ttgacagaagatagagagcacagatgat 43
>41525_sly-MIR156a:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatgatatgc 35
||||||||||||||||||||| ||||||||||||
Sbjct: 1 ttgacagaagatagagagcactaatgatgatatgc 35
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 137 catttgtgctctctatgcttctgtca 162
||||||||||||||||||||||||||
Sbjct: 74 catttgtgctctctatgcttctgtca 99
>39799_aly-MIR157b:mirbase
Length = 97
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatga 27
|||||||||||||||||||||||||||
Sbjct: 4 ttgacagaagatagagagcacagatga 30
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 139 tttgtgctctctatgcttctgtca 162
||||||||||||| ||||||||||
Sbjct: 70 tttgtgctctctaagcttctgtca 93
>41162_aqc-MIR156a:mirbase
Length = 81
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcacagatga 27
||||||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatga 26
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 tttgtgctctctatgcttctgtca 162
||||||||||||||||||||||||
Sbjct: 56 tttgtgctctctatgcttctgtca 79
>39801_aly-MIR157d:mirbase
Length = 256
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcacagatgatgatatgcaaaa 39
|||||||||||||||||||| | ||||||||||||||
Sbjct: 38 tgacagaagatagagagcactaaggatgatatgcaaaa 75
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 141 tgtgctctctatgcttctgtca 162
||||||||||||||||||||||
Sbjct: 190 tgtgctctctatgcttctgtca 211
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatgatatgca 36
||||||||||||||||||||| || ||||| |||||
Sbjct: 11 ttgacagaagatagagagcactgacgatgaaatgca 46
>40431_gma-MIR156g:mirbase
Length = 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgat 28
||||||||||||||||||||||| ||||
Sbjct: 24 ttgacagaagatagagagcacaggtgat 51
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 ttgacagaagatagagagcaca 22
||||||||||||||||||||||
Sbjct: 107 ttgacagaagatagagagcaca 86
>40336_rco-MIR156g:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatgatatgca 36
||||||||||||||||||||| || ||||| |||||
Sbjct: 6 ttgacagaagatagagagcactgacgatgaaatgca 41
>39727_smo-MIR156b:mirbase
Length = 112
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcacaga 24
|||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacaga 34
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcaca 22
||||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcaca 32
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcaca 22
||||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcaca 42
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcaca 22
||||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcaca 27
>40427_gma-MIR156c:mirbase
Length = 185
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcaca 22
||||||||||||||||||||||
Sbjct: 146 ttgacagaagatagagagcaca 167
>40335_rco-MIR156f:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcaca 22
||||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcaca 27
>40013_ath-MIR157d:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcacagatgatgatatgcaaaa 39
|||||||||||||||||||| | |||| |||||||||
Sbjct: 24 tgacagaagatagagagcactaaggatgctatgcaaaa 61
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 141 tgtgctctctatgcttctgtca 162
||||||||||||||||||||||
Sbjct: 172 tgtgctctctatgcttctgtca 193
>41527_sly-MIR156c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>41526_sly-MIR156b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>40310_bra-MIR157a:mirbase
Length = 149
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 14 ttgacagaagatagagagcac 34
>40304_bol-MIR157a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 139 tttgtgctctctatgcttctgtca 162
|||||||||||||| |||||||||
Sbjct: 78 tttgtgctctctatacttctgtca 101
>40260_bna-MIR156c:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 18 ttgacagaagatagagagcac 38
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 139 tttgtgctctctatgcttctgtca 162
|||||||||||||| |||||||||
Sbjct: 114 tttgtgctctctatacttctgtca 137
>40259_bna-MIR156b:mirbase
Length = 208
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 25 ttgacagaagatagagagcac 45
>40012_ath-MIR157c:mirbase
Length = 217
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 24 ttgacagaagatagagagcac 44
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 139 tttgtgctctctatgcttctgtca 162
|||||||||||||| |||||||||
Sbjct: 165 tttgtgctctctatacttctgtca 188
>39800_aly-MIR157c:mirbase
Length = 293
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 55 ttgacagaagatagagagcac 75
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 139 tttgtgctctctatgcttctgtca 162
|||||||||||||| |||||||||
Sbjct: 216 tttgtgctctctatacttctgtca 239
>39416_pta-MIR156b:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcaca 22
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
>39415_pta-MIR156a:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcaca 22
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
>40654_mtr-MIR156g:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcacagatgatgatatgca 36
|||||||||||||||| |||| | |||||||||||
Sbjct: 6 ttgacagaagatagagggcactaaggatgatatgca 41
