miRNEST 2.0, an integrative microRNA resource :: BLAST
>40311_bra-MIR159a:mirbase
Length = 185
Score = 357 bits (180), Expect = 2e-99
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 1 tagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatg 63
Query: 61 aatcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aatcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatct 123
Query: 121 caggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 caggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctcta 183
>40261_bna-MIR159:mirbase
Length = 183
Score = 357 bits (180), Expect = 2e-99
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 1 tagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatg 61
Query: 61 aatcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aatcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatct 121
Query: 121 caggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 caggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctcta 181
>39804_aly-MIR159a:mirbase
Length = 222
Score = 264 bits (133), Expect = 2e-71
Identities = 168/179 (93%), Gaps = 3/179 (1%)
Strand = Plus / Plus
Query: 5 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 64
||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 25 gctccttgaagttcaaacgagagttgagcagggtaaagaaaagctgctaagctatggatc 84
Query: 65 ccataagccctaatccttata---tataaaaaggatttggttatatggcttacatatctc 121
||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||
Sbjct: 85 ccataagccctaatccttataaagaaaaaaaaggatttggttatatggcttgcatatctc 144
Query: 122 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctcta 180
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 145 aggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctcta 203
>40016_ath-MIR159a:mirbase
Length = 184
Score = 244 bits (123), Expect = 2e-65
Identities = 165/178 (92%), Gaps = 2/178 (1%)
Strand = Plus / Plus
Query: 5 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 64
|||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||
Sbjct: 6 gctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctatggatc 65
Query: 65 ccataagccctaatccttatatat--aaaaaggatttggttatatggcttacatatctca 122
|||||||||||||||||| || | ||||||||||||||||||||| || |||||||||
Sbjct: 66 ccataagccctaatccttgtaaagtaaaaaaggatttggttatatggattgcatatctca 125
Query: 123 ggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctcta 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 126 ggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctcta 183
>39805_aly-MIR159b:mirbase
Length = 202
Score = 85.7 bits (43), Expect = 1e-17
Identities = 146/176 (82%), Gaps = 7/176 (3%)
Strand = Plus / Plus
Query: 5 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 64
||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||| |||
Sbjct: 19 gctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatggatc 78
Query: 65 ccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctcagg 124
|||||| || || | || | || ||||||| || ||||| || |||||||||||
Sbjct: 79 ccataaacctta--tcaaattcaaaataaggatt---ttttatggattccatatctcagg 133
Query: 125 agctttaactt-gccctttaattgcttttactcttctttggattgaagggagctct 179
|||||| |||| ||||||||| || || |||||||||||||||||||||||||||
Sbjct: 134 agctttcacttacccctttaatggc-ttcactcttctttggattgaagggagctct 188
>40017_ath-MIR159b:mirbase
Length = 196
Score = 73.8 bits (37), Expect = 4e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 5 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 64
||||||| ||||||| ||| |||||||||||| ||| ||||||||||||||||| |||
Sbjct: 7 gctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatggatc 66
Query: 65 ccataagcc 73
|||||||||
Sbjct: 67 ccataagcc 75
Score = 69.9 bits (35), Expect = 6e-13
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 114 catatctcaggagctttaacttgccc-tttaattgcttttactcttctttggattgaagg 172
||||||||||||||||| |||| ||| |||||| |||| ||||||||||||||||||||
Sbjct: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
Query: 173 gagctct 179
|||||||
Sbjct: 181 gagctct 187
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 156 cttctttggattgaagggagctcta 180
|||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctcta 173
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 156 cttctttggattgaagggagctcta 180
|||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctcta 173
>40432_gma-MIR159a:mirbase
Length = 214
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 156 cttctttggattgaagggagctcta 180
|||||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctcta 195
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 157 ttctttggattgaagggagctcta 180
||||||||||||||||||||||||
Sbjct: 149 ttctttggattgaagggagctcta 172
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42690_zma-MIR159a:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>42635_tae-MIR159b:mirbase
Length = 255
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>42494_sbi-MIR159:mirbase
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctct 223
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 221 tctttggattgaagggagctct 242
>42455_sof-MIR159d:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>42453_sof-MIR159b:mirbase
Length = 266
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>42452_sof-MIR159a:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>41918_osa-MIR159b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>41917_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41868_far-MIR159:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 167 tctttggattgaagggagctct 188
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctcta 180
>41528_sly-MIR159:mirbase
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 ggcttacatatctcaggagcttta 131
||||| ||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 ggcttacatatctcaggagcttta 131
||||| ||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 ggcttacatatctcaggagcttta 131
||||| ||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
>41218_csi-MIR159:mirbase
Length = 216
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctcta 206
>40397_ahy-MIR159:mirbase
Length = 197
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>40338_rco-MIR159:mirbase
Length = 180
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctcta 175
