miRNEST 2.0, an integrative microRNA resource :: BLAST
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 309 bits (156), Expect = 3e-85
Identities = 159/160 (99%)
Strand = Plus / Plus
Query: 4 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 74
Query: 64 acagccctatctatcaactgaaggataggtttgcggcttgcatatctcaggagctttatt 123
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 acagtcctatctatcaactgaaggataggtttgcggcttgcatatctcaggagctttatt 134
Query: 124 gcctaatgttagatccctttttggattgaagggagctcta 163
||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gcctaatgttagatccctttttggattgaagggagctcta 174
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 301 bits (152), Expect = 9e-83
Identities = 158/160 (98%)
Strand = Plus / Plus
Query: 4 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 74
Query: 64 acagccctatctatcaactgaaggataggtttgcggcttgcatatctcaggagctttatt 123
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 acagtcctatctatcaaccgaaggataggtttgcggcttgcatatctcaggagctttatt 134
Query: 124 gcctaatgttagatccctttttggattgaagggagctcta 163
||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gcctaatgttagatccctttttggattgaagggagctcta 174
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 113 bits (57), Expect = 4e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 95 tgcggcttgcatatctcaggagctttattgcctaatgttagatccctttttggattgaag 154
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 110 tgcggcttgcatatctcaggagctttattacctaatgttagatctttttttggattgaag 169
Query: 155 ggagctcta 163
|||||||||
Sbjct: 170 ggagctcta 178
>40338_rco-MIR159:mirbase
Length = 180
Score = 97.6 bits (49), Expect = 2e-21
Identities = 140/168 (83%), Gaps = 8/168 (4%)
Strand = Plus / Plus
Query: 4 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat-c 62
|||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||| |
Sbjct: 8 gctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggatcc 67
Query: 63 cacagccctat------ctatca-actgaaggataggtttgcggcttgcatatctcagga 115
||||||||||| || | | | ||||||| ||| ||||||||||||||||||
Sbjct: 68 cacagccctataagcagagattataattttggataggcttgtggcttgcatatctcagga 127
Query: 116 gctttattgcctaatgttagatccctttttggattgaagggagctcta 163
|||| ||| ||| | |||||||| | |||||||||||||||||||||
Sbjct: 128 gcttcattaccttgtattagatccttgtttggattgaagggagctcta 175
>40397_ahy-MIR159:mirbase
Length = 197
Score = 87.7 bits (44), Expect = 2e-18
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 4 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 63
|||||||||||||||| ||||| ||||| |||||||||| ||||||||||||||||||||
Sbjct: 7 gctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatggatcc 66
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 134 agatccctttttggattgaagggagctcta 163
|||||| | |||||||||||||||||||||
Sbjct: 148 agatccttatttggattgaagggagctcta 177
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 79.8 bits (40), Expect = 6e-16
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 4 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat-c 62
|||||||||||||||||||||| |||| ||||||||||| ||||||| | ||||||| |
Sbjct: 13 gctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggatcc 72
Query: 63 cacagccctatc 74
||||||||||||
Sbjct: 73 cacagccctatc 84
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 71.9 bits (36), Expect = 1e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 4 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 63
||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||||||||||
Sbjct: 6 gctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggatcc 65
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 tttggattgaagggagctcta 163
|||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctcta 173
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 71.9 bits (36), Expect = 1e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 4 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 63
||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||||||||||
Sbjct: 6 gctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggatcc 65
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 tttggattgaagggagctcta 163
|||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctcta 173
>40432_gma-MIR159a:mirbase
Length = 214
Score = 63.9 bits (32), Expect = 3e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 4 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 63
||||||||||||||||| |||| |||| |||||| ||| ||||||| ||||||||||||
Sbjct: 25 gctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggatcc 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 tttggattgaagggagctcta 163
|||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctcta 195
>41218_csi-MIR159:mirbase
Length = 216
Score = 60.0 bits (30), Expect = 5e-10
Identities = 68/78 (87%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 4 gctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagctatggat- 61
|||||||||||||||| ||||||||| || ||||| ||| ||||||| ||||||||||
Sbjct: 16 gctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatggatc 75
Query: 62 ccacagccctatctatca 79
|||||| ||||| |||||
Sbjct: 76 ccacagtcctatgtatca 93
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 141 tttttggattgaagggagctcta 163
|||||||||||||||||||||||
Sbjct: 184 tttttggattgaagggagctcta 206
>41528_sly-MIR159:mirbase
Length = 177
Score = 48.1 bits (24), Expect = 2e-06
Identities = 66/79 (83%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 87 gataggtttgcggcttgcatatctcaggagctttattg--cctaatgttagatccctttt 144
||||||||| || |||||||| |||||||||||||| || |||| |||| ||||
Sbjct: 99 gataggttttgggtttgcatatgtcaggagctttattttaccctttgtttgatcattttt 158
Query: 145 tggattgaagggagctcta 163
|||||||||||||||||||
Sbjct: 159 tggattgaagggagctcta 177
>39804_aly-MIR159a:mirbase
Length = 222
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 ggcttgcatatctcaggagcttta 121
||||||||||||||||||||||||
Sbjct: 131 ggcttgcatatctcaggagcttta 154
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 aagctgctaagctatggatcc 63
|||||||||||||||||||||
Sbjct: 65 aagctgctaagctatggatcc 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 tttggattgaagggagctcta 163
|||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctcta 203
>42635_tae-MIR159b:mirbase
Length = 255
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 138 ccctttttggattgaagggagctct 162
|||| ||||||||||||||||||||
Sbjct: 225 ccctctttggattgaagggagctct 249
>41917_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 138 ccctttttggattgaagggagctct 162
|||| ||||||||||||||||||||
Sbjct: 237 ccctctttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 138 ccctttttggattgaagggagctct 162
|||| ||||||||||||||||||||
Sbjct: 237 ccctctttggattgaagggagctct 261
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 tttggattgaagggagctcta 163
|||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctcta 172
>40311_bra-MIR159a:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 tttggattgaagggagctcta 163
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 98 ggcttgcatatctcaggagcttta 121
||||| ||||||||||||||||||
Sbjct: 111 ggcttacatatctcaggagcttta 134
