miRNEST 2.0, an integrative microRNA resource :: BLAST
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 ttgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgttgg 80
Query: 61 gagtgtgctctctactcttctgtca 85
|||||||||||||||||||||||||
Sbjct: 81 gagtgtgctctctactcttctgtca 105
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 ttgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgttgg 76
Query: 61 gagtgtgctctctactcttctgtca 85
|||||||||||||||||||||||||
Sbjct: 77 gagtgtgctctctactcttctgtca 101
>40430_gma-MIR156f:mirbase
Length = 106
Score = 73.8 bits (37), Expect = 2e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgttgg 60
||||||||||||||||||||||||||| | |||||| |||| | ||| ||||||||||
Sbjct: 11 ttgacagaagagagagagcacaacccg-ggaatggttaaaggagtctttgcctttgttgg 69
Query: 61 gagtgtgctctct 73
|||||||||||||
Sbjct: 70 gagtgtgctctct 82
>40334_rco-MIR156e:mirbase
Length = 95
Score = 73.8 bits (37), Expect = 2e-14
Identities = 74/85 (87%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgttgg 60
||||||||||||||||||||||||||| | || ||||| ||||| ||||||||||
Sbjct: 5 ttgacagaagagagagagcacaacccggcattaggctaaagagtctttg-cctttgttgg 63
Query: 61 gagtgtgctctctactcttctgtca 85
||||||||||||| |||||||||||
Sbjct: 64 gagtgtgctctctcctcttctgtca 88
>40426_gma-MIR156b:mirbase
Length = 120
Score = 58.0 bits (29), Expect = 1e-09
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgttgg 60
||||||||||||||||||||||||||| | ||||| |||| | ||| ||||||||||
Sbjct: 20 ttgacagaagagagagagcacaacccg-ggaatggctaaaggagtctttgcctttgttgg 78
Query: 61 gagtgtgctctct 73
|||||||| ||||
Sbjct: 79 gagtgtgccctct 91
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacaacccg 27
|||||||||||||||||||||||||||
Sbjct: 20 ttgacagaagagagagagcacaacccg 46
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 53 tttgttgggagtgtgctctctactcttctgtca 85
||||||||||||||||| ||| ||||||||||
Sbjct: 72 tttgttgggagtgtgctttctcttcttctgtca 104
>41914_osa-MIR156k:mirbase
Length = 106
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacaacccg 27
||||||||||||||||||||||||||
Sbjct: 11 tgacagaagagagagagcacaacccg 36
>41204_aqc-MIR529:mirbase
Length = 125
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacaaccc 26
||||||||||||||||||||||||||
Sbjct: 17 ttgacagaagagagagagcacaaccc 42
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 53 tttgttgggagtgtgctctctactcttctgtca 85
||||||||||||||||||| | |||||||||||
Sbjct: 69 tttgttgggagtgtgctctttgctcttctgtca 101
>42687_zma-MIR156j:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacaaccc 26
|||||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>42488_sbi-MIR156d:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacaaccc 26
|||||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>41877_far-MIR529:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcaca 22
||||||||||||||||||||||
Sbjct: 47 ttgacagaagagagagagcaca 68
>41867_far-MIR156b:mirbase
Length = 180
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcaca 22
||||||||||||||||||||||
Sbjct: 53 ttgacagaagagagagagcaca 74
>41866_far-MIR156a:mirbase
Length = 180
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcaca 22
||||||||||||||||||||||
Sbjct: 53 ttgacagaagagagagagcaca 74
>41726_bdi-MIR156:mirbase
Length = 147
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcaca 22
||||||||||||||||||||||
Sbjct: 100 ttgacagaagagagagagcaca 121
>41561_vvi-MIR156a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacaaccc 26
|||||||||||||| |||||||||||
Sbjct: 10 ttgacagaagagagggagcacaaccc 35
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 57 ttgggagtgtgctctctactcttctgtca 85
||||||||||||||||| ||||||||||
Sbjct: 64 ttgggagtgtgctctctcttcttctgtca 92
>41298_ptc-MIR156k:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacaaccc 26
||||||||||||| |||||||||||
Sbjct: 11 tgacagaagagagggagcacaaccc 35
>40648_mtr-MIR156:mirbase
Length = 460
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcaca 22
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>40427_gma-MIR156c:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacaacc 25
||||||||||| |||||||||||||
Sbjct: 146 ttgacagaagatagagagcacaacc 170
>40009_ath-MIR156h:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacaacc 25
||||||||||| |||||||||||||
Sbjct: 11 ttgacagaagaaagagagcacaacc 35
>39797_aly-MIR156h:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacaacc 25
||||||||||| |||||||||||||
Sbjct: 7 ttgacagaagaaagagagcacaacc 31
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacaac 24
||||||||||| ||||||||||||
Sbjct: 11 ttgacagaagatagagagcacaac 34
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacaac 24
||||||||||| ||||||||||||
Sbjct: 21 ttgacagaagatagagagcacaac 44
>40335_rco-MIR156f:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacaac 24
||||||||||| ||||||||||||
Sbjct: 6 ttgacagaagatagagagcacaac 29
>39506_ppt-MIR529d:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 cagaagagagagagcacaacccga 28
|||||||||||||||||| |||||
Sbjct: 36 cagaagagagagagcacagcccga 59
>39416_pta-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacaacc 25
|||||||||| |||||||||||||
Sbjct: 3 tgacagaagatagagagcacaacc 26
>41568_vvi-MIR156h:mirbase
Length = 228
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagca 20
|||||||||||||||||||
Sbjct: 11 tgacagaagagagagagca 29
>40431_gma-MIR156g:mirbase
Length = 118
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1 ttgacagaagagagagagcacaa 23
||||||||||| |||||||||||
Sbjct: 107 ttgacagaagatagagagcacaa 85
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacaa 23
||||||||||| |||||||||||
Sbjct: 23 ttgacagaagatagagagcacaa 45
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacaa 23
||||||||||| |||||||||||
Sbjct: 23 ttgacagaagatagagagcacaa 45
