miRNEST 2.0, an integrative microRNA resource :: BLAST
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 65.9 bits (33), Expect = 9e-12
Identities = 65/73 (89%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgga 59
||||||||||||||||||| ||||| | |||| ||||| || |||||||||| |||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 60 ttccacagtccta 72
||||||||||||
Sbjct: 72 -tccacagtccta 83
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 92 ggataggcttgcggcttgcatatgttaggagcttt 126
||||||| ||||||||||||||| | |||||||||
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagcttt 131
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 65.9 bits (33), Expect = 9e-12
Identities = 65/73 (89%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgga 59
||||||||||||||||||| ||||| | |||| ||||| || |||||||||| |||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 60 ttccacagtccta 72
||||||||||||
Sbjct: 72 -tccacagtccta 83
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 92 ggataggcttgcggcttgcatatgttaggagcttt 126
||||||| ||||||||||||||| | |||||||||
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagcttt 131
>41528_sly-MIR159:mirbase
Length = 177
Score = 60.0 bits (30), Expect = 6e-10
Identities = 58/65 (89%), Gaps = 3/65 (4%)
Strand = Plus / Plus
Query: 107 ttgcatatgttaggagcttt--tttacctctttgttttatctttctttggattgaaggga 164
|||||||||| ||||||||| |||||| |||||||| ||| || |||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttacc-ctttgtttgatcattttttggattgaaggga 171
Query: 165 gctct 169
|||||
Sbjct: 172 gctct 176
>41218_csi-MIR159:mirbase
Length = 216
Score = 60.0 bits (30), Expect = 6e-10
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggat-ttgc-agggtaaatcaagctgctaatctatgg 58
||||||||||||||||||||||||| | | || ||||||||| ||||||| | ||||||
Sbjct: 13 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 72
Query: 59 attccacagtccta 72
|| |||||||||||
Sbjct: 73 atcccacagtccta 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 145 ctttctttggattgaagggagctct 169
|||| ||||||||||||||||||||
Sbjct: 181 ctttttttggattgaagggagctct 205
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 58.0 bits (29), Expect = 2e-09
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 101 tgcggcttgcatatgttaggagcttttttacctctttgttttatctttctttggattgaa 160
|||||||||||||| | ||||||||| |||||| | ||| |||||| |||||||||||
Sbjct: 110 tgcggcttgcatatctcaggagctttattacctaat-gttagatctttttttggattgaa 168
Query: 161 gggagctct 169
|||||||||
Sbjct: 169 gggagctct 177
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 138 gttttatctttctttggattgaagggagctct 169
|||| |||||||||||||||||||||||||||
Sbjct: 140 gtttaatctttctttggattgaagggagctct 171
>40338_rco-MIR159:mirbase
Length = 180
Score = 52.0 bits (26), Expect = 1e-07
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 92 ggataggcttgcggcttgcatatgttaggagcttttttacctctttgttttatctttctt 151
||||||||||| ||||||||||| | |||||||| |||||| | | || ||| || ||
Sbjct: 98 ggataggcttgtggcttgcatatctcaggagcttcattacct-tgtattagatccttgtt 156
Query: 152 tggattgaagggagctct 169
||||||||||||||||||
Sbjct: 157 tggattgaagggagctct 174
Score = 50.1 bits (25), Expect = 5e-07
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgga 59
||||||||||||||||||| ||||||| ||| ||||| || ||||||| | |||||||
Sbjct: 5 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 64
Query: 60 ttccacagtccta 72
| |||||| ||||
Sbjct: 65 tcccacagcccta 77
>40397_ahy-MIR159:mirbase
Length = 197
Score = 50.1 bits (25), Expect = 5e-07
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgga 59
||||||||||||||||||| ||||| | ||| ||||| || ||||||||| |||||||
Sbjct: 4 ggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgga 63
Query: 60 ttccacagt 68
| |||||||
Sbjct: 64 tcccacagt 72
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctct 172
>40432_gma-MIR159a:mirbase
Length = 214
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 172 ttctttggattgaagggagctct 194
Score = 42.1 bits (21), Expect = 1e-04
Identities = 58/69 (84%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgga 59
||||||||||||||||||| |||||| || | |||| ||| ||||||| | |||||||
Sbjct: 22 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 81
Query: 60 ttccacagt 68
| |||||||
Sbjct: 82 tcccacagt 90
>40311_bra-MIR159a:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctct 182
>40261_bna-MIR159:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 158 ttctttggattgaagggagctct 180
>40017_ath-MIR159b:mirbase
Length = 196
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 165 ttctttggattgaagggagctct 187
>40016_ath-MIR159a:mirbase
Length = 184
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctct 182
>39805_aly-MIR159b:mirbase
Length = 202
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 166 ttctttggattgaagggagctct 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 53/61 (86%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaaaagaggattt-gcagggtaaa-tcaagctgctaatctatgga 59
|||||||||||||| ||| |||| ||| |||||||||| | |||||||||| |||||||
Sbjct: 17 gagctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatgga 76
Query: 60 t 60
|
Sbjct: 77 t 77
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 180 ttctttggattgaagggagctct 202
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42690_zma-MIR159a:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>42635_tae-MIR159b:mirbase
Length = 255
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>42494_sbi-MIR159:mirbase
Length = 226
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctct 223
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 221 tctttggattgaagggagctct 242
>42455_sof-MIR159d:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>42453_sof-MIR159b:mirbase
Length = 266
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>42452_sof-MIR159a:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>41918_osa-MIR159b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>41917_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41868_far-MIR159:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 167 tctttggattgaagggagctct 188
