miRNEST 2.0, an integrative microRNA resource :: BLAST
>41528_sly-MIR159:mirbase
Length = 177
Score = 329 bits (166), Expect = 4e-91
Identities = 173/174 (99%), Gaps = 1/174 (0%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatggat 62
Query: 61 tcctcagccctatctatttatgatttcaaacatatagataggtttgtgggtttgcatatg 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 63 tcctcagccctatctatttatgatttcaaacatatagataggttt-tgggtttgcatatg 121
Query: 121 tcaggagctttattttaccctttgtttgatcattttttggattgaagggagctc 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tcaggagctttattttaccctttgtttgatcattttttggattgaagggagctc 175
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 56.0 bits (28), Expect = 9e-09
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 112 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 171
|||||||| |||||||||||||| ||| |||| |||| |||||||||||||||||||
Sbjct: 116 ttgcatatctcaggagctttatt--acctaatgttagatctttttttggattgaagggag 173
Query: 172 ctc 174
|||
Sbjct: 174 ctc 176
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 52.0 bits (26), Expect = 1e-07
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatggat 60
|||||||||||||||||| | | ||| || || || |||||||||||||| |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 tcctcagccctatc 74
|| ||||||||||
Sbjct: 71 cccacagccctatc 84
>40338_rco-MIR159:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 39 attgagctgctgacctatggattcctcagccctat 73
||||||||||||| |||||||| || |||||||||
Sbjct: 44 attgagctgctgagctatggatcccacagccctat 78
Score = 40.1 bits (20), Expect = 5e-04
Identities = 53/63 (84%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 112 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 171
|||||||| |||||||||| ||| ||| | | || |||| || ||||||||||||||||
Sbjct: 113 ttgcatatctcaggagcttcatt--accttgtattagatccttgtttggattgaagggag 170
Query: 172 ctc 174
|||
Sbjct: 171 ctc 173
>41218_csi-MIR159:mirbase
Length = 216
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 36 taaattgagctgctgacctatggattcctcagccctat 73
|||||||||||||||| |||||||| || ||| |||||
Sbjct: 50 taaattgagctgctgagctatggatcccacagtcctat 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 153 ttttttggattgaagggagctc 174
||||||||||||||||||||||
Sbjct: 183 ttttttggattgaagggagctc 204
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 tttttggattgaagggagctc 174
|||||||||||||||||||||
Sbjct: 152 tttttggattgaagggagctc 172
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 tttttggattgaagggagctc 174
|||||||||||||||||||||
Sbjct: 152 tttttggattgaagggagctc 172
>40397_ahy-MIR159:mirbase
Length = 197
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaaca 20
||||||||||||||||||||
Sbjct: 5 gagctccttgaagtccaaca 24
>39424_pta-MIR319:mirbase
Length = 206
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 151 cattttttggattgaagggagctc 174
||||| ||||||||||||||||||
Sbjct: 32 catttcttggattgaagggagctc 9
>39417_pta-MIR159a:mirbase
Length = 210
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 151 cattttttggattgaagggagctc 174
||||| ||||||||||||||||||
Sbjct: 179 catttcttggattgaagggagctc 202
