miRNEST 2.0, an integrative microRNA resource :: BLAST
>41218_csi-MIR159:mirbase
Length = 216
Score = 345 bits (174), Expect = 8e-96
Identities = 188/195 (96%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 71
Query: 61 gatcccacagtcctatgtatcagattttagggtttgtttctgatgatggtgatgataggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 gatcccacagtcctatgtatcagattttagggtttgtttctgatgatggtgatgataggc 131
Query: 121 ttgtggcttgcatatttctggaccttcattaccccttaagtttttaccccnnnnnnngga 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 132 ttgtggcttgcatatttctggaccttcattaccccttaagtttttacccctttttttgga 191
Query: 181 ttgaagggagctcta 195
|||||||||||||||
Sbjct: 192 ttgaagggagctcta 206
>40338_rco-MIR159:mirbase
Length = 180
Score = 87.7 bits (44), Expect = 3e-18
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| ||||| ||| | | ||||| |||||||||||||||||||
Sbjct: 4 tggagctccttgaagtccaatagaggatcttg-atgggtagattgagctgctgagctatg 62
Query: 61 gatcccacagtcctat 76
|||||||||| |||||
Sbjct: 63 gatcccacagccctat 78
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 114 gataggcttgtggcttgcatatttctggaccttcattacc 153
|||||||||||||||||||||| || ||| ||||||||||
Sbjct: 99 gataggcttgtggcttgcatatctcaggagcttcattacc 138
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 75.8 bits (38), Expect = 1e-14
Identities = 73/82 (89%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| ||||||||| || ||||| ||| ||||||| |||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagctatg 69
Query: 61 gatcccacagtcctatgtatca 82
||| |||||||||||| |||||
Sbjct: 70 gat-ccacagtcctatctatca 90
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 75.8 bits (38), Expect = 1e-14
Identities = 73/82 (89%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| ||||||||| || ||||| ||| ||||||| |||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagctatg 69
Query: 61 gatcccacagtcctatgtatca 82
||| |||||||||||| |||||
Sbjct: 70 gat-ccacagtcctatctatca 90
>40397_ahy-MIR159:mirbase
Length = 197
Score = 69.9 bits (35), Expect = 7e-13
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| ||||| ||| | ||||| ||||||||||| |||||||
Sbjct: 3 tggagctccttgaagtccaacagagggtcttggt-gggtagattgagctgctaagctatg 61
Query: 61 gatcccacagt 71
|||||||||||
Sbjct: 62 gatcccacagt 72
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 63.9 bits (32), Expect = 4e-11
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| ||||| ||| | ||||| ||||||||||||| ||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttact-gggtagattgagctgctgacttatg 67
Query: 61 gatcccacagtcctat 76
|||||||||| |||||
Sbjct: 68 gatcccacagccctat 83
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 gataggcttgtggcttgcatat 135
||||||||||||||||||||||
Sbjct: 104 gataggcttgtggcttgcatat 125
>40432_gma-MIR159a:mirbase
Length = 214
Score = 61.9 bits (31), Expect = 2e-10
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| |||| ||| | |||| |||||||||||| |||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttact-gggtgaattgagctgcttagctatg 79
Query: 61 gatcccacagt 71
|||||||||||
Sbjct: 80 gatcccacagt 90
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 56.0 bits (28), Expect = 1e-08
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| ||| | || || ||||| || ||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgct-gggtagatcgagctgctgagctatg 69
Query: 61 gatcccacagtcctat 76
||||||||| |||||
Sbjct: 70 aatcccacagccctat 85
>40435_gma-MIR159d:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 36 gggtaaattgagctgctgagctatggatcccacagt 71
|||| |||||||||||| ||||||||||||||||||
Sbjct: 1 gggtgaattgagctgcttagctatggatcccacagt 36
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 54.0 bits (27), Expect = 4e-08
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| |||| ||| | |||| ||||||||||| |||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttact-gggtggattgagctgcttagctatg 60
Query: 61 gatcccacagt 71
|||||||||||
Sbjct: 61 gatcccacagt 71
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 54.0 bits (27), Expect = 4e-08
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| |||| ||| | |||| ||||||||||| |||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttact-gggtggattgagctgcttagctatg 60
Query: 61 gatcccacagt 71
|||||||||||
Sbjct: 61 gatcccacagt 71
>41528_sly-MIR159:mirbase
Length = 177
Score = 48.1 bits (24), Expect = 3e-06
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| | | |||| || || |||||||||||||||| |||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaaca-ggttaaattgagctgctgacctatg 59
Query: 61 gatcccacagtcctat 76
||| || ||| |||||
Sbjct: 60 gattcctcagccctat 75
