miRNEST 2.0, an integrative microRNA resource :: BLAST
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 4 ggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacgaaaaacatga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacgaaaaacatga 72
Query: 64 accgatcgataaacctctgcatccag 89
||||||||||||||||||||||||||
Sbjct: 73 accgatcgataaacctctgcatccag 98
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 99.6 bits (50), Expect = 3e-22
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 4 ggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacgaaaaacatga 63
|||||||||||||||||||||| |||||| | |||||||||| |||||| |||| ||
Sbjct: 13 ggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacgaacaacacga 72
Query: 64 accgatcgataaacctctgcatccag 89
||||||||||||||||||||||||||
Sbjct: 73 accgatcgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 99.6 bits (50), Expect = 3e-22
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 4 ggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacgaaaaacatga 63
|||||||||||||||||||||| |||||| | |||||||||| |||||| |||| ||
Sbjct: 13 ggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacgaacaacacga 72
Query: 64 accgatcgataaacctctgcatccag 89
||||||||||||||||||||||||||
Sbjct: 73 accgatcgataaacctctgcatccag 98
>41090_tcc-MIR162:mirbase
Length = 131
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 4 ggaggcagcggttcatcgatctcttcctgg 33
||||||||||||||||||||||||||||||
Sbjct: 23 ggaggcagcggttcatcgatctcttcctgg 52
>40342_rco-MIR162:mirbase
Length = 101
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 4 ggaggcagcggttcatcgatctcttcctgg 33
||||||||||||||||||||||||||||||
Sbjct: 6 ggaggcagcggttcatcgatctcttcctgg 35
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 59 catgaaccgatcgataaacctctgcatccag 89
|||||| ||||||||||||||||||||||||
Sbjct: 66 catgaatcgatcgataaacctctgcatccag 96
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 4 ggaggcagcggttcatcgatctcttcctgg 33
||||||||||||||||||||||||||||||
Sbjct: 15 ggaggcagcggttcatcgatctcttcctgg 44
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 57 aacatgaaccgatcgataaacctctgcatccag 89
|||||||| ||||||||||||||||||||||||
Sbjct: 68 aacatgaatcgatcgataaacctctgcatccag 100
>39812_aly-MIR162a:mirbase
Length = 228
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 4 ggaggcagcggttcatcgatctcttcctgg 33
||||||||||||||||||||||||||||||
Sbjct: 70 ggaggcagcggttcatcgatctcttcctgg 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 54 aaaaacatgaaccgatcgataaacctctgcatccag 89
|||| |||||| |||||||||||||||||||||||
Sbjct: 121 aaaagcatgaatagatcgataaacctctgcatccag 156
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 4 ggaggcagcggttcatcgatctcttcctg 32
|||||||||||||||||||||||||||||
Sbjct: 26 ggaggcagcggttcatcgatctcttcctg 54
>40437_gma-MIR162:mirbase
Length = 102
Score = 58.0 bits (29), Expect = 1e-09
Identities = 69/82 (84%), Gaps = 4/82 (4%)
Strand = Plus / Plus
Query: 8 gcagcggttcatcgatctcttcctggccaattttttgtttagcacgaaaaacatgaaccg 67
||||||||||||||||||||||||| | | ||||||| || | || |||||| ||
Sbjct: 16 gcagcggttcatcgatctcttcctg----aatcgttgtttaacatcagaaccatgaatcg 71
Query: 68 atcgataaacctctgcatccag 89
||||||||||||||||||||||
Sbjct: 72 atcgataaacctctgcatccag 93
>40024_ath-MIR162a:mirbase
Length = 140
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 4 ggaggcagcggttcatcgatctcttcctg 32
|||||||||||||||||||||||||||||
Sbjct: 27 ggaggcagcggttcatcgatctcttcctg 55
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 54 aaaaacatgaaccgatcgataaacctctgcatccag 89
|||| |||||| |||||||||||||||||||||||
Sbjct: 74 aaaagcatgaatagatcgataaacctctgcatccag 109
>41220_csi-MIR162:mirbase
Length = 201
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 58 acatgaaccgatcgataaacctctgcatccag 89
||||||| ||||||||||||||||||||||||
Sbjct: 150 acatgaatcgatcgataaacctctgcatccag 181
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 ggaggcagcggttcatcgatc 24
|||||||||||||||||||||
Sbjct: 91 ggaggcagcggttcatcgatc 111
>39813_aly-MIR162b:mirbase
Length = 184
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 54 aaaaacatgaaccgatcgataaacctctgcatccag 89
|||| |||||| ||||||||||||||||||||||||
Sbjct: 98 aaaagcatgaatcgatcgataaacctctgcatccag 133
>40663_mtr-MIR162:mirbase
Length = 124
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 56 aaacatgaaccgatcgataaacctctgcatccag 89
||||||||| || |||||||||||||||||||||
Sbjct: 74 aaacatgaatcggtcgataaacctctgcatccag 107
>41578_vvi-MIR162:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 gcagcggttcatcgatctcttcctg 32
|||||||||||||||||||||||||
Sbjct: 15 gcagcggttcatcgatctcttcctg 39
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tcgataaacctctgcatccag 89
|||||||||||||||||||||
Sbjct: 73 tcgataaacctctgcatccag 93
>42502_sbi-MIR162:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 cgatcgataaacctctgcatccag 89
||||||||||||||||||||||||
Sbjct: 104 cgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 cgatcgataaacctctgcatccag 89
||||||||||||||||||||||||
Sbjct: 140 cgatcgataaacctctgcatccag 163
>40025_ath-MIR162b:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 cgatcgataaacctctgcatccag 89
||||||||||||||||||||||||
Sbjct: 76 cgatcgataaacctctgcatccag 99
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 ggaggcagcggttcatcgatc 24
|||||||||||||||||||||
Sbjct: 14 ggaggcagcggttcatcgatc 34
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 cgatcgataaacctctgcatcc 87
||||||||||||||||||||||
Sbjct: 108 cgatcgataaacctctgcatcc 129
>42708_zma-MIR162:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tcgataaacctctgcatccag 89
|||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130
>41530_sly-MIR162:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tcgataaacctctgcatccag 89
|||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatccag 99
>41930_osa-MIR162b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 66 cgatcgataaacctctgcatccag 89
|||||||||| |||||||||||||
Sbjct: 101 cgatcgataagcctctgcatccag 124
