miRNEST 2.0, an integrative microRNA resource :: BLAST
>42454_sof-MIR159c:mirbase
Length = 238
Score = 341 bits (172), Expect = 1e-94
Identities = 172/172 (100%)
Strand = Plus / Plus
Query: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 105
Query: 61 tgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatgaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatgaccc 165
Query: 121 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 172
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 217
>42495_sbi-MIR159b:mirbase
Length = 253
Score = 333 bits (168), Expect = 3e-92
Identities = 171/172 (99%)
Strand = Plus / Plus
Query: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 120
Query: 61 tgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatgaccc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcctctctggtgcagcaatgactgatgctcacctgcacttgcatgggtgtgcatgaccc 180
Query: 121 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 172
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 232
>42692_zma-MIR159c:mirbase
Length = 217
Score = 268 bits (135), Expect = 1e-72
Identities = 165/174 (94%), Gaps = 2/174 (1%)
Strand = Plus / Plus
Query: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 82
Query: 61 tgcctctctggtgcagcaatgactaatgctcac--ctgcacttgcatgggtgtgcatgac 118
| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||
Sbjct: 83 tacctctctggtgcagcaatggccgctgctcacctctgcacttgcatgggtgtgcatgac 142
Query: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 172
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctc 196
>42693_zma-MIR159d:mirbase
Length = 217
Score = 260 bits (131), Expect = 3e-70
Identities = 164/174 (94%), Gaps = 2/174 (1%)
Strand = Plus / Plus
Query: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 23 gagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcatgga 82
Query: 61 tgcctctctggtgcagcaatgactaa--tgctcacctgcacttgcatgggtgtgcatgac 118
| ||||||||||||||||||| | | ||||||||||||||||||||||||||||||||
Sbjct: 83 tacctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgtgcatgac 142
Query: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 172
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctc 196
>41730_bdi-MIR159:mirbase
Length = 234
Score = 155 bits (78), Expect = 1e-38
Identities = 153/174 (87%), Gaps = 3/174 (1%)
Strand = Plus / Plus
Query: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 30 gagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcatgga 89
Query: 61 tgcctctctggtgca-gcaatg-actaatgctcacctgcacttgcatgggtgtgcatgac 118
| ||| ||||||||| ||| || |||| | | |||| ||||| ||| ||||||||
Sbjct: 90 tacctgtctggtgcatgcagtgtggtaatagcctgc-gcacctgcatcggtttgcatgac 148
Query: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 172
|||||||||||||| ||| | ||||||||||||||||||||||||||||||||
Sbjct: 149 ccgggagatgaacctgccagcgtctttccctcgtgcttggattgaagggagctc 202
>41922_osa-MIR159f:mirbase
Length = 188
Score = 131 bits (66), Expect = 2e-31
Identities = 146/172 (84%), Gaps = 8/172 (4%)
Strand = Plus / Plus
Query: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
|||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 13 gagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggttcatgga 72
Query: 61 tgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatgaccc 120
| ||||| |||| ||| | | ||| ||||||||||||||| ||||||||||
Sbjct: 73 tacctctgcagtgc----atgtcgtaggct----tgcacttgcatgggtttgcatgaccc 124
Query: 121 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 172
|||||||||||||||||| |||| | || |||||||||||||||||||||
Sbjct: 125 gggagatgaacccaccattgtcttcctcttatgcttggattgaagggagctc 176
>41919_osa-MIR159c:mirbase
Length = 197
Score = 97.6 bits (49), Expect = 3e-21
Identities = 143/173 (82%), Gaps = 1/173 (0%)
Strand = Plus / Plus
Query: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
||||||| ||||||||||| |||||| ||||||||| || ||||||||||| ||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtaggatgcagctgccgattcatgga 72
Query: 61 tgcctctctggtgca-gcaatgactaatgctcacctgcacttgcatgggtgtgcatgacc 119
| ||||| ||||| | | | | || ||||||||||||||||| |||||||||
Sbjct: 73 tacctctggagtgcatggcagcaatgctgtaggcctgcacttgcatgggtttgcatgacc 132
Query: 120 cgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 172
||||||||||||||||||| |||| | || || ||||||||||||||||||
Sbjct: 133 cgggagatgaacccaccattgtcttcctctattgattggattgaagggagctc 185
>41920_osa-MIR159d:mirbase
Length = 189
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
||||||| ||||||||||| |||||| ||||||||| || ||||||||||||||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatgga 72
Query: 61 tgcctct 67
| |||||
Sbjct: 73 tacctct 79
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 93 cctgcacttgcatgggtgtgcatgacccgggagatgaacc 132
||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 98 cctgcacttgcatgggtttgcatgacctgggagatgaacc 137
>41921_osa-MIR159e:mirbase
Length = 191
Score = 79.8 bits (40), Expect = 6e-16
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 1 gagctccctt-cgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgg 59
|||||||||| ||||||||| |||||| ||||||||| || |||||||||||||||||||
Sbjct: 13 gagctccctttcgatccaattcaggagaggaagtggtaggatgcagctgccggttcatgg 72
Query: 60 atgcctct 67
|| |||||
Sbjct: 73 atacctct 80
