miRNEST 2.0, an integrative microRNA resource :: BLAST
>40342_rco-MIR162:mirbase
Length = 101
Score = 83.8 bits (42), Expect = 2e-17
Identities = 84/94 (89%), Gaps = 3/94 (3%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctggagattttttgttctg-aactgcaat-aa 58
||||||||||||||||||||||||||||||||| | ||||||| || ||| ||| ||
Sbjct: 4 ctggaggcagcggttcatcgatctcttcctgga-agattttgttgtgaaacaaaaataaa 62
Query: 59 acacatgaatcgatcgataaacctctgcatccag 92
|| |||||||||||||||||||||||||||||||
Sbjct: 63 acgcatgaatcgatcgataaacctctgcatccag 96
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 73.8 bits (37), Expect = 2e-14
Identities = 82/93 (88%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctggagattttttgttctga-actgcaataaa 59
||||||||||||||||||||||||||||||| ||| |||| ||| ||| | | | |||
Sbjct: 24 ctggaggcagcggttcatcgatctcttcctg-agaatttt-gttgtgagaataacacaaa 81
Query: 60 cacatgaatcgatcgataaacctctgcatccag 92
||||||||||||||||||||||||||||||||
Sbjct: 82 tacatgaatcgatcgataaacctctgcatccag 114
>41090_tcc-MIR162:mirbase
Length = 131
Score = 67.9 bits (34), Expect = 1e-12
Identities = 80/93 (86%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctggagattttttgttctga-actgcaataaa 59
|||||||||||||||||||||||||||||||| | ||||||| ||| | | | |||
Sbjct: 21 ctggaggcagcggttcatcgatctcttcctgggaa--ttttgttgtgagaataacacaaa 78
Query: 60 cacatgaatcgatcgataaacctctgcatccag 92
|||||| |||||||||||||||||||||||||
Sbjct: 79 tacatgattcgatcgataaacctctgcatccag 111
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 65.9 bits (33), Expect = 5e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctggagatttttt 41
|||||||||||||||||||||||| |||||| |||||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctgaagatttttt 51
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 65.9 bits (33), Expect = 5e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctggagatttttt 41
|||||||||||||||||||||||| |||||| |||||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctgaagatttttt 51
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 65.9 bits (33), Expect = 5e-12
Identities = 79/93 (84%), Gaps = 6/93 (6%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgg-agattttttgttctgaactgcaataaa 59
|||||||||||||||||||||||||||||||| |||||||||| ||| |||
Sbjct: 11 ctggaggcagcggttcatcgatctcttcctggccaattttttgtt-----tagcacgaaa 65
Query: 60 cacatgaatcgatcgataaacctctgcatccag 92
||||||| ||||||||||||||||||||||||
Sbjct: 66 aacatgaaccgatcgataaacctctgcatccag 98
>41220_csi-MIR162:mirbase
Length = 201
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 61 acatgaatcgatcgataaacctctgcatccag 92
||||||||||||||||||||||||||||||||
Sbjct: 150 acatgaatcgatcgataaacctctgcatccag 181
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgg 32
||||||||||||||||||||||||||||||||
Sbjct: 13 ctggaggcagcggttcatcgatctcttcctgg 44
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 61 acatgaatcgatcgataaacctctgcatccag 92
||||||||||||||||||||||||||||||||
Sbjct: 69 acatgaatcgatcgataaacctctgcatccag 100
>39812_aly-MIR162a:mirbase
Length = 228
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgg 32
||||||||||||||||||||||||||||||||
Sbjct: 68 ctggaggcagcggttcatcgatctcttcctgg 99
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 62 catgaatcgatcgataaacctctgcatccag 92
||||||| |||||||||||||||||||||||
Sbjct: 126 catgaatagatcgataaacctctgcatccag 156
>40437_gma-MIR162:mirbase
Length = 102
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 62 catgaatcgatcgataaacctctgcatccag 92
|||||||||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccag 93
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
||||| |||||||||||||||||||||||||
Sbjct: 10 ctggatgcagcggttcatcgatctcttcctg 40
>40024_ath-MIR162a:mirbase
Length = 140
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 25 ctggaggcagcggttcatcgatctcttcctg 55
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 62 catgaatcgatcgataaacctctgcatccag 92
||||||| |||||||||||||||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatccag 109
>39813_aly-MIR162b:mirbase
Length = 184
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 62 catgaatcgatcgataaacctctgcatccag 92
|||||||||||||||||||||||||||||||
Sbjct: 103 catgaatcgatcgataaacctctgcatccag 133
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 50 ctggaggcagcggttcatcgatc 72
>42502_sbi-MIR162:mirbase
Length = 127
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatccag 92
||||||||||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatccag 92
||||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>40663_mtr-MIR162:mirbase
Length = 124
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 61 acatgaatcgatcgataaacctctgcatccag 92
|||||||||| |||||||||||||||||||||
Sbjct: 76 acatgaatcggtcgataaacctctgcatccag 107
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
||||| |||||||||||||||||| ||||||
Sbjct: 21 ctggatgcagcggttcatcgatctgttcctg 51
>40025_ath-MIR162b:mirbase
Length = 111
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatccag 92
||||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccag 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 12 ctggaggcagcggttcatcgatc 34
>41578_vvi-MIR162:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
||||| |||||||||||||||||||||||||
Sbjct: 9 ctggatgcagcggttcatcgatctcttcctg 39
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatccag 92
|||||| |||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccag 93
>41736_bdi-MIR162:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatcc 90
||||||||||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>42708_zma-MIR162:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatccag 92
|||||| |||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41930_osa-MIR162b:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatccag 92
|||||||||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
>41530_sly-MIR162:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatccag 92
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
