miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41058_ghr-MIR396b:mirbase
          Length = 135

 Score =  228 bits (115), Expect = 7e-61
 Identities = 115/115 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttccacagctttcttgaactgcaatttcatgtaatcagatcattcattcattcattgtcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11  ttccacagctttcttgaactgcaatttcatgtaatcagatcattcattcattcattgtcg 70

                                                                  
Query: 61  ttgatggtgttgcatacatacgagtacgttgttgcggttcaataaagctgtggga 115
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  ttgatggtgttgcatacatacgagtacgttgttgcggttcaataaagctgtggga 125




>41057_ghr-MIR396a:mirbase
          Length = 136

 Score =  204 bits (103), Expect = 1e-53
 Identities = 112/115 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttccacagctttcttgaactgcaatttcatgtaatcagatcattcattcattcattgtcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 11  ttccacagctttcttgaactgcaatttcatgtaatcagatcattcattcattcgttgtcg 70

                                                                  
Query: 61  ttgatggtgttgcatacatacgagtacgttgttgcggttcaataaagctgtggga 115
           ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 71  ttgatggtgctgcatatatacgagtacgttgttgcggttcaataaagctgtggga 125




>41435_ptc-MIR396a:mirbase
          Length = 123

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 89  ttgttgcggttcaataaagctgtggga 115
           |||||||||||||||||||||||||||
Sbjct: 89  ttgttgcggttcaataaagctgtggga 115



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33




>41242_csi-MIR396b:mirbase
          Length = 134

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 89  ttgttgcggttcaataaagctgtggga 115
           |||||||||||||||||||||||||||
Sbjct: 79  ttgttgcggttcaataaagctgtggga 105



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 20 ttccacagctttcttgaactgca 42




>41139_tcc-MIR396b:mirbase
          Length = 151

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 77  catacgagtacgttgttgcggttcaataaagctgtggga 115
           |||||| ||| |||||||| |||||||||||||||||||
Sbjct: 93  catacgggtatgttgttgcagttcaataaagctgtggga 131



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ttccacagctttcttgaactgc 22
          ||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgc 42




>41663_vvi-MIR396d:mirbase
          Length = 120

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 91  gttgcggttcaataaagctgtggga 115
           |||||||||||||||||||||||||
Sbjct: 84  gttgcggttcaataaagctgtggga 108



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33




>41188_aqc-MIR396a:mirbase
          Length = 122

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 92  ttgcggttcaataaagctgtggga 115
           ||||||||||||||||||||||||
Sbjct: 97  ttgcggttcaataaagctgtggga 120



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaactgca 23




>40727_mtr-MIR396b:mirbase
          Length = 95

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 92  ttgcggttcaataaagctgtggga 115
           ||||||||||||||||||||||||
Sbjct: 67  ttgcggttcaataaagctgtggga 90



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 6  ttccacagctttcttgaactgca 28




>40646_lja-MIR396:mirbase
          Length = 108

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 92  ttgcggttcaataaagctgtggga 115
           ||||||||||||||||||||||||
Sbjct: 71  ttgcggttcaataaagctgtggga 94



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaactgca 38




>40473_gma-MIR396a:mirbase
          Length = 140

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 92  ttgcggttcaataaagctgtggga 115
           ||||||||||||||||||||||||
Sbjct: 98  ttgcggttcaataaagctgtggga 121



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43




>40085_ath-MIR396a:mirbase
          Length = 151

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacagctttcttgaactgcaa 24
          ||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcaa 34



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 92  ttgcggttcaataaagctgtggga 115
           ||||||||||||||||||||||||
Sbjct: 118 ttgcggttcaataaagctgtggga 141




>39877_aly-MIR396a:mirbase
          Length = 172

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  ttccacagctttcttgaactgcaa 24
          ||||||||||||||||||||||||
Sbjct: 24 ttccacagctttcttgaactgcaa 47



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 92  ttgcggttcaataaagctgtggga 115
           ||||||||||||||||||||||||
Sbjct: 128 ttgcggttcaataaagctgtggga 151




>42814_zma-MIR396h:mirbase
          Length = 124

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaactgca 76




>42813_zma-MIR396g:mirbase
          Length = 114

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 1   ttccacagctttcttgaactgca 23
           |||||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaactgca 89




>42808_zma-MIR396b:mirbase
          Length = 136

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43




>42807_zma-MIR396a:mirbase
          Length = 137

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43




>42583_sbi-MIR396b:mirbase
          Length = 128

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43




>42582_sbi-MIR396a:mirbase
          Length = 125

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43




>42472_ssp-MIR396:mirbase
          Length = 95

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaactgca 23




>42461_sof-MIR396:mirbase
          Length = 134

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43




>42027_osa-MIR396b:mirbase
          Length = 116

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33




>42026_osa-MIR396a:mirbase
          Length = 154

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33




>41794_bdi-MIR396d:mirbase
          Length = 152

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaactgca 55




>41436_ptc-MIR396b:mirbase
          Length = 132

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  ttccacagctttcttgaactgca 23
          |||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 93  tgcggttcaataaagctgtggga 115
           |||||||||||||||||||||||
Sbjct: 102 tgcggttcaataaagctgtggga 124




>41793_bdi-MIR396c:mirbase
          Length = 153

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ttccacagctttcttgaactgc 22
          ||||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaactgc 54




>41662_vvi-MIR396c:mirbase
          Length = 108

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttccacagctttcttgaactg 21
          |||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactg 31




>41241_csi-MIR396a:mirbase
          Length = 153

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttccacagctttcttgaactg 21
          |||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactg 41




>41138_tcc-MIR396a:mirbase
          Length = 146

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttccacagctttcttgaactg 21
          |||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactg 41




>40477_gma-MIR396e:mirbase
          Length = 114

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  ttccacagctttcttgaactg 21
          |||||||||||||||||||||
Sbjct: 7  ttccacagctttcttgaactg 27




>42812_zma-MIR396f:mirbase
          Length = 117

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 2  ttccacagctttcttgaact 21




>42811_zma-MIR396e:mirbase
          Length = 166

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 2  ttccacagctttcttgaact 21




>42584_sbi-MIR396c:mirbase
          Length = 162

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>42028_osa-MIR396c:mirbase
          Length = 141

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>41795_bdi-MIR396e:mirbase
          Length = 201

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51




>41661_vvi-MIR396b:mirbase
          Length = 108

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33




>41660_vvi-MIR396a:mirbase
          Length = 116

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33




>41439_ptc-MIR396e:mirbase
          Length = 145

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>41438_ptc-MIR396d:mirbase
          Length = 154

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>41437_ptc-MIR396c:mirbase
          Length = 102

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>41243_csi-MIR396c:mirbase
          Length = 178

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 13 ttccacagctttcttgaact 32




>41212_ccl-MIR396:mirbase
          Length = 277

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 1   ttccacagctttcttgaact 20
           ||||||||||||||||||||
Sbjct: 143 ttccacagctttcttgaact 162




>41189_aqc-MIR396b:mirbase
          Length = 89

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20




>41142_tcc-MIR396e:mirbase
          Length = 146

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>41140_tcc-MIR396c:mirbase
          Length = 152

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>40726_mtr-MIR396a:mirbase
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 6  ttccacagctttcttgaact 25




>40476_gma-MIR396d:mirbase
          Length = 108

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>40475_gma-MIR396c:mirbase
          Length = 117

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>40474_gma-MIR396b:mirbase
          Length = 126

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>40379_rco-MIR396:mirbase
          Length = 124

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 6  ttccacagctttcttgaact 25




>40296_bna-MIR396a:mirbase
          Length = 117

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20




>40086_ath-MIR396b:mirbase
          Length = 135

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>39878_aly-MIR396b:mirbase
          Length = 188

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51




>39426_pta-MIR396:mirbase
          Length = 119

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaact 36




>39379_pab-MIR396a:mirbase
          Length = 100

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ttccacagctttcttgaact 20
          ||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35