miRNEST 2.0, an integrative microRNA resource :: BLAST
>40367_rco-MIR319a:mirbase
Length = 211
Score = 123 bits (62), Expect = 5e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 123 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 182
|||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 133 cagtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtacttggact 192
Query: 183 gaagggagctccct 196
||||||||||||||
Sbjct: 193 gaagggagctccct 206
Score = 103 bits (52), Expect = 5e-23
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 1 agagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcat 60
|||||||||||||||||||| |||||||||| |||||||| |||||||| |||||||||
Sbjct: 4 agagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactcat 63
Query: 61 tcatccaaatgctgag 76
|||||||||| |||||
Sbjct: 64 tcatccaaatactgag 79
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 115 bits (58), Expect = 1e-26
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 123 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 182
|||||| ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 107 cagtaaatgagtgaatgatgcgggagacaaattgaatcctaagcttcctgtacttggact 166
Query: 183 gaagggagctccct 196
||||||||||||||
Sbjct: 167 gaagggagctccct 180
Score = 103 bits (52), Expect = 5e-23
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 1 agagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcat 60
|||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||||||
Sbjct: 10 agagagctttcttcagtccactcatgggtggtagtaggatttaattagctgccgactcat 69
Query: 61 tcatccaaatgctgag 76
|||||||||| |||||
Sbjct: 70 tcatccaaatactgag 85
>41282_ctr-MIR319:mirbase
Length = 186
Score = 113 bits (57), Expect = 5e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 123 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 182
|||||| ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||
Sbjct: 104 cagtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtgcttggact 163
Query: 183 gaagggagctccc 195
|||||||||||||
Sbjct: 164 gaagggagctccc 176
Score = 69.9 bits (35), Expect = 7e-13
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 4 gagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcattca 63
||||||||||| ||||| |||||||||| ||||||| |||||||| | ||||||||||
Sbjct: 10 gagctttcttcggtccacttatgggtggcaataggatttaattagctgctgactcattca 69
Query: 64 tccaaat 70
|||||||
Sbjct: 70 tccaaat 76
>40464_gma-MIR319a:mirbase
Length = 207
Score = 109 bits (55), Expect = 8e-25
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 130 tgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggactgaaggga 189
||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||
Sbjct: 123 tgagtgaatgatgcgggagacaaattgaatcttaagtttcctgtacttggactgaaggga 182
Query: 190 gctccct 196
|||||||
Sbjct: 183 gctccct 189
Score = 103 bits (52), Expect = 5e-23
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 1 agagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcat 60
|||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||||||
Sbjct: 20 agagagctttcttcagtccactcatgggtgacagtaagattcaattagctgccgactcat 79
Query: 61 tcatccaaatgctgag 76
||||||||||| ||||
Sbjct: 80 tcatccaaatgttgag 95
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 107 bits (54), Expect = 3e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 1 agagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcat 60
|||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||
Sbjct: 10 agagagctttcttcagtccactcatgggtggcagtaggattgaattagctgccgactcat 69
Query: 61 tcatccaaat 70
||||||||||
Sbjct: 70 tcatccaaat 79
Score = 107 bits (54), Expect = 3e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 123 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 182
|||||| ||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 98 cagtaaatgattgaatgatgcgggagacaaattggatcttaagctccctgtgcttggact 157
Query: 183 gaagggagctccct 196
||||||||||||||
Sbjct: 158 gaagggagctccct 171
>40465_gma-MIR319b:mirbase
Length = 208
Score = 103 bits (52), Expect = 5e-23
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 121 ctcagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttgga 180
||||| || ||||||||||||||||||||||| ||| ||||||| ||||||||||||||
Sbjct: 115 ctcagcaaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttgga 174
Query: 181 ctgaagggagctccct 196
||||||||||||||||
Sbjct: 175 ctgaagggagctccct 190
Score = 81.8 bits (41), Expect = 2e-16
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 agagagctttcttcagtccaaacatgggtggcagtaggatt-caattagcttccgactca 59
|||||||||||||||||||| ||||||| || || |||| ||||||||| ||||||||
Sbjct: 20 agagagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgactca 79
Query: 60 ttcatccaaatgctgag 76
|||||||||||||||||
Sbjct: 80 ttcatccaaatgctgag 96
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 101 bits (51), Expect = 2e-22
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 130 tgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggactgaaggga 189
||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||
Sbjct: 110 tgagtgaatgatgcgggagacaaattgaatcttaagtttcctatacttggactgaaggga 169
Query: 190 gctccct 196
|||||||
Sbjct: 170 gctccct 176
Score = 65.9 bits (33), Expect = 1e-11
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 agagagctttcttcagtccaaacatgggtggcagtaggatt-caattagcttccgactca 59
||||||||||||| |||||| |||||||| || || |||| ||||||||| | ||||||
Sbjct: 3 agagagctttctttagtccactcatgggtgacaataagatttcaattagctgctgactca 62
Query: 60 ttcatccaaatgctgag 76
|||||||||||| ||||
Sbjct: 63 ttcatccaaatgttgag 79
>41544_sly-MIR319:mirbase
Length = 168
Score = 93.7 bits (47), Expect = 5e-20
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 121 ctcagtaactgagtgaatgatgcgggag-acaagttggatcttaagcttcctgtacttgg 179
||||| |||||||||||||| ||||||| |||||||| |||| ||||||||||||||||
Sbjct: 94 ctcagcaactgagtgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttgg 153
Query: 180 actgaagggagctcc 194
|||||||||||||||
Sbjct: 154 actgaagggagctcc 168
Score = 52.0 bits (26), Expect = 2e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 35 taggattcaattagcttccgactcattcatccaaatgctgag 76
|||| ||||||| ||| |||||||||||||||||||| ||||
Sbjct: 31 tagggttcaatttgctgccgactcattcatccaaatgttgag 72
>41185_aqc-MIR319:mirbase
Length = 177
Score = 79.8 bits (40), Expect = 7e-16
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 125 gtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggactga 184
|||| ||| |||||||| ||||||| | |||||||||| ||||| ||||||||||||||
Sbjct: 104 gtaaatgaatgaatgatccgggagattaattggatcttatgcttcttgtacttggactga 163
Query: 185 agggagctccct 196
||||||||||||
Sbjct: 164 agggagctccct 175
Score = 54.0 bits (27), Expect = 4e-08
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 1 agagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcat 60
|||||||| ||||||||||| ||| ||| | ||| ||||||||| ||| |||||||||
Sbjct: 1 agagagctctcttcagtccactcataggtagtagtcagattcaatttgctgccgactcat 60
Query: 61 tcatcca 67
|||||||
Sbjct: 61 tcatcca 67
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 67.9 bits (34), Expect = 3e-12
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 123 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 182
|||||| ||| ||| ||||||||||||||| || ||||||| |||||| | |||||||
Sbjct: 104 cagtaaatgaatgagtgatgcgggagacaaattaaatcttaaacttcctatcattggact 163
Query: 183 gaagggagctccct 196
||||||||||||||
Sbjct: 164 gaagggagctccct 177
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 38 gattcaattagcttccgactcattcatccaaatgctgag 76
|||| |||||| | ||||||||||||||||||| |||||
Sbjct: 47 gatttaattagttaccgactcattcatccaaatactgag 85
>40069_ath-MIR319a:mirbase
Length = 176
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 38 gattcaattagcttccgactcattcatccaaat 70
|||||||||||||||||||||||||||||||||
Sbjct: 40 gattcaattagcttccgactcattcatccaaat 72
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 176 ttggactgaagggagctccct 196
|||||||||||||||||||||
Sbjct: 154 ttggactgaagggagctccct 174
>39858_aly-MIR319a:mirbase
Length = 221
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 42 caattagcttccgactcattcatccaaat 70
|||||||||||||||||||||||||||||
Sbjct: 67 caattagcttccgactcattcatccaaat 95
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 176 ttggactgaagggagctccct 196
|||||||||||||||||||||
Sbjct: 177 ttggactgaagggagctccct 197
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 170 ctgtacttggactgaagggagctccct 196
|||| ||||||||||||||||||||||
Sbjct: 156 ctgtgcttggactgaagggagctccct 182
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 170 ctgtacttggactgaagggagctccct 196
|||| ||||||||||||||||||||||
Sbjct: 159 ctgtgcttggactgaagggagctccct 185
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 170 ctgtacttggactgaagggagctccct 196
|||| ||||||||||||||||||||||
Sbjct: 162 ctgtgcttggactgaagggagctccct 188
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agagagctttcttcagtcca 20
||||||||||||||||||||
Sbjct: 10 agagagctttcttcagtcca 29
>40369_rco-MIR319c:mirbase
Length = 188
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 170 ctgtacttggactgaagggagctccct 196
|||| ||||||||||||||||||||||
Sbjct: 157 ctgtgcttggactgaagggagctccct 183
>42642_tae-MIR319:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 175 cttggactgaagggagctccct 196
||||||||||||||||||||||
Sbjct: 183 cttggactgaagggagctccct 204
>41770_bdi-MIR319:mirbase
Length = 280
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 175 cttggactgaagggagctccct 196
||||||||||||||||||||||
Sbjct: 225 cttggactgaagggagctccct 246
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 175 cttggactgaagggagctccct 196
||||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctccct 183
>40703_mtr-MIR319:mirbase
Length = 207
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 175 cttggactgaagggagctccct 196
||||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctccct 189
>40368_rco-MIR319b:mirbase
Length = 179
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 175 cttggactgaagggagctccct 196
||||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctccct 174
>40070_ath-MIR319b:mirbase
Length = 172
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 175 cttggactgaagggagctccct 196
||||||||||||||||||||||
Sbjct: 151 cttggactgaagggagctccct 172
>39859_aly-MIR319b:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 175 cttggactgaagggagctccct 196
||||||||||||||||||||||
Sbjct: 190 cttggactgaagggagctccct 211
>39740_smo-MIR319:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 175 cttggactgaagggagctccct 196
||||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccct 206
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 170 ctgtacttggactgaagggagctcc 194
|||| ||||||||||||||||||||
Sbjct: 170 ctgtgcttggactgaagggagctcc 194
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 170 ctgtacttggactgaagggagctcc 194
|||| ||||||||||||||||||||
Sbjct: 168 ctgtgcttggactgaagggagctcc 192
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 175 cttggactgaagggagctccc 195
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 175 cttggactgaagggagctccc 195
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 175 cttggactgaagggagctccc 195
|||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174
>41639_vvi-MIR319g:mirbase
Length = 222
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 176 ttggactgaagggagctccc 195
||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 cttggactgaagggagctcc 194
||||||||||||||||||||
Sbjct: 409 cttggactgaagggagctcc 428
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 cttggactgaagggagctcc 194
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 cttggactgaagggagctcc 194
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
