miRNEST 2.0, an integrative microRNA resource :: BLAST
>41220_csi-MIR162:mirbase
Length = 201
Score = 180 bits (91), Expect = 1e-46
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 tggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaat 149
Query: 61 acatgaatcgatcgataaacctctgcatcca 91
|||||||||||||||||||||||||||||||
Sbjct: 150 acatgaatcgatcgataaacctctgcatcca 180
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 101 bits (51), Expect = 8e-23
Identities = 83/91 (91%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaat 60
|||||||||||||||||||||| ||| || ||||||||||||| || ||||||||| |
Sbjct: 25 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaa-taacacaaa-t 82
Query: 61 acatgaatcgatcgataaacctctgcatcca 91
|||||||||||||||||||||||||||||||
Sbjct: 83 acatgaatcgatcgataaacctctgcatcca 113
>41090_tcc-MIR162:mirbase
Length = 131
Score = 93.7 bits (47), Expect = 2e-20
Identities = 82/91 (90%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaat 60
|||||||||||||||||||||| ||| || ||||||||||||| || ||||||||| |
Sbjct: 22 tggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaa-taacacaaa-t 79
Query: 61 acatgaatcgatcgataaacctctgcatcca 91
|||||| ||||||||||||||||||||||||
Sbjct: 80 acatgattcgatcgataaacctctgcatcca 110
>40342_rco-MIR162:mirbase
Length = 101
Score = 79.8 bits (40), Expect = 3e-16
Identities = 81/92 (88%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatcactttgtgcaa-attttgttgtgaaaaataacacaaaa 59
|||||||||||||||||||||| ||| || || |||||||||||||| | || | ||||
Sbjct: 5 tggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaa-ataaaa 63
Query: 60 tacatgaatcgatcgataaacctctgcatcca 91
||||||||||||||||||||||||||||||
Sbjct: 64 cgcatgaatcgatcgataaacctctgcatcca 95
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 67.9 bits (34), Expect = 1e-12
Identities = 78/91 (85%), Gaps = 5/91 (5%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaat 60
|||||||||||||||||||||| ||| || ||||| || ||||||||| ||| ||
Sbjct: 14 tggaggcagcggttcatcgatctcttcctgggaatttggt-gtgaaaaatcacagaa--- 69
Query: 61 acatgaatcgatcgataaacctctgcatcca 91
||||||||||||||||||||||||||||||
Sbjct: 70 -catgaatcgatcgataaacctctgcatcca 99
>40437_gma-MIR162:mirbase
Length = 102
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 62 catgaatcgatcgataaacctctgcatcca 91
||||||||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatcca 92
>39813_aly-MIR162b:mirbase
Length = 184
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 62 catgaatcgatcgataaacctctgcatcca 91
||||||||||||||||||||||||||||||
Sbjct: 103 catgaatcgatcgataaacctctgcatcca 132
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatca 23
|||||||||||||||||||||||
Sbjct: 51 tggaggcagcggttcatcgatca 73
>42502_sbi-MIR162:mirbase
Length = 127
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatcca 91
|||||||||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatcca 126
>41929_osa-MIR162a:mirbase
Length = 171
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatcca 91
|||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatcca 162
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 61 acatgaatcgatcgataaacctctgcatcca 91
||||||| |||||||||||||||||||||||
Sbjct: 67 acatgaaccgatcgataaacctctgcatcca 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 12 tggaggcagcggttcatcgatc 33
>40663_mtr-MIR162:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 61 acatgaatcgatcgataaacctctgcatcca 91
|||||||||| ||||||||||||||||||||
Sbjct: 76 acatgaatcggtcgataaacctctgcatcca 106
>40025_ath-MIR162b:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatcca 91
|||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatcca 98
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatca 23
|||||||||||||||||||||||
Sbjct: 13 tggaggcagcggttcatcgatca 35
>41736_bdi-MIR162:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatcc 90
||||||||||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>40024_ath-MIR162a:mirbase
Length = 140
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 62 catgaatcgatcgataaacctctgcatcca 91
||||||| ||||||||||||||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatcca 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 26 tggaggcagcggttcatcgatc 47
>39812_aly-MIR162a:mirbase
Length = 228
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 62 catgaatcgatcgataaacctctgcatcca 91
||||||| ||||||||||||||||||||||
Sbjct: 126 catgaatagatcgataaacctctgcatcca 155
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 69 tggaggcagcggttcatcgatc 90
>42708_zma-MIR162:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatcca 91
|||||| ||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatcca 129
>41930_osa-MIR162b:mirbase
Length = 134
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatcca 91
|||||||||||||| ||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatcca 123
>41578_vvi-MIR162:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatcca 91
|||||| ||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatcca 92
>41530_sly-MIR162:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatcca 91
|||||| ||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatcca 98
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 cgatcgataaacctctgcatcca 91
|||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatcca 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 12 tggaggcagcggttcatcgatc 33
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 cgatcgataaacctctgcatcca 91
|||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatcca 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 12 tggaggcagcggttcatcgatc 33
