miRNEST 2.0, an integrative microRNA resource :: BLAST
>40464_gma-MIR319a:mirbase
Length = 207
Score = 204 bits (103), Expect = 2e-53
Identities = 153/167 (91%), Gaps = 2/167 (1%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 60
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 23 gagctttcttcagtccactcatgggtgacagtaagattcaattagctgccgactcattca 82
Query: 61 tccaaatgctgagtagtgatactcttaaagatactcatcaaatgagtgaatgatgcggga 120
|||||||| ||||| || | | |||| ||||||| || |||||||||||||||||||
Sbjct: 83 tccaaatgttgagt-gtaag-cgaataaatatactcagcagatgagtgaatgatgcggga 140
Query: 121 gacaaattgattcttaagtttcctgtacttggactgaagggagctcc 167
|||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 141 gacaaattgaatcttaagtttcctgtacttggactgaagggagctcc 187
>40465_gma-MIR319b:mirbase
Length = 208
Score = 196 bits (99), Expect = 4e-51
Identities = 154/169 (91%), Gaps = 5/169 (2%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagatt-caattagctgccgactcattc 59
||||||||||||||||||| || |||| || ||||||| |||||||||||||||||||||
Sbjct: 23 gagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgactcattc 82
Query: 60 atccaaatgctgagtagtgata-ctcttaaagatactcatcaaatgagtgaatgatgcgg 118
||||||||||||||| || | | ||||||||||| ||||||||||||||||||||
Sbjct: 83 atccaaatgctgagt---gaaagcgaagaaagatactcagcaaatgagtgaatgatgcgg 139
Query: 119 gagacaaattgattcttaagtttcctgtacttggactgaagggagctcc 167
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gagacaaattgattcttaagtttcctgtacttggactgaagggagctcc 188
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 161 bits (81), Expect = 2e-40
Identities = 149/169 (88%), Gaps = 2/169 (1%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagatt-caattagctgccgactcattc 59
|||||||||| ||||||||||| |||| || ||||||| ||||||||||| |||||||||
Sbjct: 6 gagctttctttagtccactcatgggtgacaataagatttcaattagctgctgactcattc 65
Query: 60 atccaaatgctgagtagtg-atactcttaaagatactcatcaaatgagtgaatgatgcgg 118
||||||||| |||||| ||| | | ||||||||||||||||||||||||||||
Sbjct: 66 atccaaatgttgagtaaaatatatagaaacatatactcatcaaatgagtgaatgatgcgg 125
Query: 119 gagacaaattgattcttaagtttcctgtacttggactgaagggagctcc 167
|||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 126 gagacaaattgaatcttaagtttcctatacttggactgaagggagctcc 174
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 137 bits (69), Expect = 3e-33
Identities = 145/168 (86%), Gaps = 3/168 (1%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 60
|||||||||||||||||||||| ||||| |||| |||| |||||||||||||||||||||
Sbjct: 13 gagctttcttcagtccactcatgggtggtagtaggatttaattagctgccgactcattca 72
Query: 61 tccaaatgctgagtagtgatactcttaaagat-actcatcaaatgagtgaatgatgcggg 119
||||||| |||||| | | | |||| || || ||||||||||||||||||||
Sbjct: 73 tccaaatactgagt--taaaggacaaggagattacccagtaaatgagtgaatgatgcggg 130
Query: 120 agacaaattgattcttaagtttcctgtacttggactgaagggagctcc 167
||||||||||| || |||| ||||||||||||||||||||||||||||
Sbjct: 131 agacaaattgaatcctaagcttcctgtacttggactgaagggagctcc 178
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 123 bits (62), Expect = 4e-29
Identities = 141/168 (83%), Gaps = 12/168 (7%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 60
|||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||
Sbjct: 13 gagctttcttcagtccactcatgggtggcagtaggattgaattagctgccgactcattca 72
Query: 61 tccaaatgctgagtagtgatactcttaaaga-tactcatcaaatgagtgaatgatgcggg 119
||||||| ||| | |||| || ||| || |||||| |||||||||||||
Sbjct: 73 tccaaatactg-----------tgttaaggactacccagtaaatgattgaatgatgcggg 121
Query: 120 agacaaattgattcttaagtttcctgtacttggactgaagggagctcc 167
|||||||||| ||||||| | ||||| ||||||||||||||||||||
Sbjct: 122 agacaaattggatcttaagctccctgtgcttggactgaagggagctcc 169
>41282_ctr-MIR319:mirbase
Length = 186
Score = 121 bits (61), Expect = 2e-28
Identities = 143/168 (85%), Gaps = 3/168 (1%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 60
||||||||||| ||||||| || ||||||| || |||| |||||||||| ||||||||||
Sbjct: 10 gagctttcttcggtccacttatgggtggcaataggatttaattagctgctgactcattca 69
Query: 61 tccaaatgctgagtagtgatactcttaaag-atactcatcaaatgagtgaatgatgcggg 119
||||||| || |||| | || || | |||| || ||||||||||||||||||||
Sbjct: 70 tccaaatacttagtaaaggg--tcgaaatggatacccagtaaatgagtgaatgatgcggg 127
Query: 120 agacaaattgattcttaagtttcctgtacttggactgaagggagctcc 167
||||||||||| ||||||| ||||||| ||||||||||||||||||||
Sbjct: 128 agacaaattgaatcttaagcttcctgtgcttggactgaagggagctcc 175
>40367_rco-MIR319a:mirbase
Length = 211
Score = 119 bits (60), Expect = 7e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 100 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 159
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 137 aaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtacttggactgaag 196
Query: 160 ggagctcc 167
||||||||
Sbjct: 197 ggagctcc 204
Score = 107 bits (54), Expect = 3e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 60
|||||||||||||||||||||| |||||| ||| |||| |||||||||||||||||||||
Sbjct: 7 gagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactcattca 66
Query: 61 tccaaatgctgagt 74
||||||| ||||||
Sbjct: 67 tccaaatactgagt 80
>41185_aqc-MIR319:mirbase
Length = 177
Score = 87.7 bits (44), Expect = 2e-18
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 60
||||| |||||||||||||||||||| | ||| |||||||||| ||||||||||||||||
Sbjct: 4 gagctctcttcagtccactcataggtagtagtcagattcaatttgctgccgactcattca 63
Query: 61 tcca 64
||||
Sbjct: 64 tcca 67
Score = 63.9 bits (32), Expect = 4e-11
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 100 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 159
|||||| |||||||| ||||||| ||||| ||||| | ||| ||||||||||||||||
Sbjct: 106 aaatgaatgaatgatccgggagattaattggatcttatgcttcttgtacttggactgaag 165
Query: 160 ggagctcc 167
||||||||
Sbjct: 166 ggagctcc 173
>41544_sly-MIR319:mirbase
Length = 168
Score = 77.8 bits (39), Expect = 2e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 94 ctcatcaaatgagtgaatgatgcgggag-acaaattgattcttaagtttcctgtacttgg 152
|||| ||| ||||||||||| ||||||| |||| |||| |||| || |||||||||||||
Sbjct: 94 ctcagcaactgagtgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttgg 153
Query: 153 actgaagggagctcc 167
|||||||||||||||
Sbjct: 154 actgaagggagctcc 168
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 63.9 bits (32), Expect = 4e-11
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 100 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 159
|||||| ||| |||||||||||||||||| | |||||| ||||| | |||||||||||
Sbjct: 108 aaatgaatgagtgatgcgggagacaaattaaatcttaaacttcctatcattggactgaag 167
Query: 160 ggagctcc 167
||||||||
Sbjct: 168 ggagctcc 175
>40070_ath-MIR319b:mirbase
Length = 172
Score = 63.9 bits (32), Expect = 4e-11
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 100 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 159
|||||| ||||||||||| |||||||||||| |||| | || || | ||||||||||||
Sbjct: 103 aaatgaatgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaag 162
Query: 160 ggagctcc 167
||||||||
Sbjct: 163 ggagctcc 170
>39859_aly-MIR319b:mirbase
Length = 246
Score = 63.9 bits (32), Expect = 4e-11
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 100 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 159
|||||| ||||||||||| |||||||||||| |||| | || || | ||||||||||||
Sbjct: 142 aaatgaatgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaag 201
Query: 160 ggagctcc 167
||||||||
Sbjct: 202 ggagctcc 209
>40069_ath-MIR319a:mirbase
Length = 176
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 35 gattcaattagctgccgactcattcatccaaat 67
||||||||||||| |||||||||||||||||||
Sbjct: 40 gattcaattagcttccgactcattcatccaaat 72
>39858_aly-MIR319a:mirbase
Length = 221
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 39 caattagctgccgactcattcatccaaat 67
||||||||| |||||||||||||||||||
Sbjct: 67 caattagcttccgactcattcatccaaat 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 100 aaatgagtgaatgatgcgggagacaaattg 129
|||||| |||||||||||| ||||||||||
Sbjct: 128 aaatgaatgaatgatgcggtagacaaattg 157
>42781_zma-MIR319b:mirbase
Length = 213
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 aattagctgccgactcattcatccaaatgc 69
||||||||||||||||||||| ||| ||||
Sbjct: 63 aattagctgccgactcattcacccacatgc 92
>42563_sbi-MIR319:mirbase
Length = 249
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 aattagctgccgactcattcatccaaatgc 69
||||||||||||||||||||| ||| ||||
Sbjct: 75 aattagctgccgactcattcacccacatgc 104
>41995_osa-MIR319b:mirbase
Length = 197
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 aattagctgccgactcattcatccaaatgc 69
||||||||||||||||||||| ||| ||||
Sbjct: 53 aattagctgccgactcattcacccacatgc 82
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 attagctgccgactcattcatccaaa 66
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 143 ctgtacttggactgaagggagctcc 167
|||| ||||||||||||||||||||
Sbjct: 156 ctgtgcttggactgaagggagctcc 180
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 aattagctgccgactcattcat 61
||||||||||||||||||||||
Sbjct: 55 aattagctgccgactcattcat 76
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 143 ctgtacttggactgaagggagctcc 167
|||| ||||||||||||||||||||
Sbjct: 168 ctgtgcttggactgaagggagctcc 192
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 attagctgccgactcattcatccaaa 66
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 143 ctgtacttggactgaagggagctcc 167
|||| ||||||||||||||||||||
Sbjct: 159 ctgtgcttggactgaagggagctcc 183
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gagctttcttcagtccactcat 22
||||||||||||||||||||||
Sbjct: 13 gagctttcttcagtccactcat 34
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 attagctgccgactcattcatccaaa 66
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 143 ctgtacttggactgaagggagctcc 167
|||| ||||||||||||||||||||
Sbjct: 162 ctgtgcttggactgaagggagctcc 186
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 101 aatgagtgaatgatgcgggagacaaatt 128
|||| ||||||||||||||||| |||||
Sbjct: 119 aatgtgtgaatgatgcgggagataaatt 146
>42783_zma-MIR319d:mirbase
Length = 212
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 41 attagctgccgactcattcatccaaatgc 69
|||||||||||||||||||| ||| ||||
Sbjct: 63 attagctgccgactcattcacccacatgc 91
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 143 ctgtacttggactgaagggagctcc 167
|||| ||||||||||||||||||||
Sbjct: 170 ctgtgcttggactgaagggagctcc 194
>40369_rco-MIR319c:mirbase
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 143 ctgtacttggactgaagggagctcc 167
|||| ||||||||||||||||||||
Sbjct: 157 ctgtgcttggactgaagggagctcc 181
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 101 aatgagtgaatgatgcgggagacaaatt 128
|||| ||||||||||||||||| |||||
Sbjct: 114 aatgtgtgaatgatgcgggagataaatt 141
>42642_tae-MIR319:mirbase
Length = 211
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 cttggactgaagggagctcc 167
||||||||||||||||||||
Sbjct: 183 cttggactgaagggagctcc 202
>41770_bdi-MIR319:mirbase
Length = 280
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 cttggactgaagggagctcc 167
||||||||||||||||||||
Sbjct: 225 cttggactgaagggagctcc 244
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 cttggactgaagggagctcc 167
||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctcc 181
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 cttggactgaagggagctcc 167
||||||||||||||||||||
Sbjct: 409 cttggactgaagggagctcc 428
>40703_mtr-MIR319:mirbase
Length = 207
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 cttggactgaagggagctcc 167
||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctcc 187
>40368_rco-MIR319b:mirbase
Length = 179
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 cttggactgaagggagctcc 167
||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctcc 172
>39740_smo-MIR319:mirbase
Length = 215
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 cttggactgaagggagctcc 167
||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcc 204
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 cttggactgaagggagctcc 167
||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctcc 166
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 cttggactgaagggagctcc 167
||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctcc 164
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 cttggactgaagggagctcc 167
||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 cttggactgaagggagctcc 167
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 cttggactgaagggagctcc 167
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
