miRNEST 2.0, an integrative microRNA resource :: BLAST
>40338_rco-MIR159:mirbase
Length = 180
Score = 337 bits (170), Expect = 2e-93
Identities = 170/170 (100%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 64
Query: 61 tcccacagccctataagcagagattataattttggataggcttgtggcttgcatatctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tcccacagccctataagcagagattataattttggataggcttgtggcttgcatatctca 124
Query: 121 ggagcttcattaccttgtattagatccttgtttggattgaagggagctct 170
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ggagcttcattaccttgtattagatccttgtttggattgaagggagctct 174
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 123 bits (62), Expect = 5e-29
Identities = 146/171 (85%), Gaps = 6/171 (3%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 60
||||||||||||||||||||||| | || || ||||||||| |||||||||||||||| |
Sbjct: 12 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 71
Query: 61 tcccacagccctataagca-gagattataattttggataggcttgtggcttgcatatctc 119
|||||||||||||| | || || | ||||| ||| ||| || ||||||||||||||
Sbjct: 72 tcccacagccctatcaccatcag----tcatttt-gatgggcctgcggcttgcatatctc 126
Query: 120 aggagcttcattaccttgtattagatccttgtttggattgaagggagctct 170
|||||||| ||||||| | ||||||| || ||||||||||||||||||||
Sbjct: 127 aggagctttattacctaatgttagatctttttttggattgaagggagctct 177
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 117 bits (59), Expect = 3e-27
Identities = 145/171 (84%), Gaps = 2/171 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 60
||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||
Sbjct: 10 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 69
Query: 61 tcccacagccctataagcagagattataattttggataggcttgtggcttgcatatctca 120
|||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 70 tcccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatatctca 129
Query: 121 ggagcttcatta-ccttgtattagatccttgtttggattgaagggagctct 170
|||||| ||||| || || |||||||||||||||||||||||||||||||
Sbjct: 130 ggagctgcattatccaagt-ttagatccttgtttggattgaagggagctct 179
>40397_ahy-MIR159:mirbase
Length = 197
Score = 103 bits (52), Expect = 4e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 60
||||||||||||||||||| ||||| ||||| |||||||||||||||||| |||||||||
Sbjct: 4 ggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgga 63
Query: 61 tcccacag 68
||||||||
Sbjct: 64 tcccacag 71
Score = 52.0 bits (26), Expect = 1e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 121 ggagcttcattaccttgtattagatccttgtttggattgaagggagctct 170
|||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 127 ggagcttcattacctttccacagatccttatttggattgaagggagctct 176
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 95.6 bits (48), Expect = 1e-20
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 60
|||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 tcccacag 68
||||||||
Sbjct: 63 tcccacag 70
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 95.6 bits (48), Expect = 1e-20
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 60
|||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 tcccacag 68
||||||||
Sbjct: 63 tcccacag 70
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 93.7 bits (47), Expect = 4e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 60
||||||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 tcc 63
|||
Sbjct: 72 tcc 74
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 93.7 bits (47), Expect = 4e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 60
||||||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 tcc 63
|||
Sbjct: 72 tcc 74
>40432_gma-MIR159a:mirbase
Length = 214
Score = 87.7 bits (44), Expect = 3e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 60
|||||||||||||||||||| ||||||||| ||||| ||||||||||| |||||||||
Sbjct: 22 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 81
Query: 61 tcccacag 68
||||||||
Sbjct: 82 tcccacag 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 146 ccttgtttggattgaagggagctct 170
|||| ||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctct 194
>41218_csi-MIR159:mirbase
Length = 216
Score = 85.7 bits (43), Expect = 1e-17
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttg-atgggtagattgagctgctgagctatgg 59
||||||||||||||||||| ||||| ||| | | ||||| ||||||||||||||||||||
Sbjct: 13 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 72
Query: 60 atcccacagccctat 74
||||||||| |||||
Sbjct: 73 atcccacagtcctat 87
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 95 gataggcttgtggcttgcatatctcaggagcttcattacc 134
|||||||||||||||||||||| || ||| ||||||||||
Sbjct: 125 gataggcttgtggcttgcatatttctggaccttcattacc 164
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctct 205
>40435_gma-MIR159d:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 40 attgagctgctgagctatggatcccacag 68
||||||||||| |||||||||||||||||
Sbjct: 7 attgagctgcttagctatggatcccacag 35
>41528_sly-MIR159:mirbase
Length = 177
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 40 attgagctgctgagctatggatcccacagccctat 74
||||||||||||| |||||||| || |||||||||
Sbjct: 41 attgagctgctgacctatggattcctcagccctat 75
Score = 42.1 bits (21), Expect = 1e-04
Identities = 54/64 (84%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 109 ttgcatatctcaggagcttcatt--accttgtattagatccttgtttggattgaagggag 166
|||||||| |||||||||| ||| ||| | | || |||| || ||||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 172
Query: 167 ctct 170
||||
Sbjct: 173 ctct 176
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 105 tggcttgcatatctcaggagctt 127
|||||||||||||||||||||||
Sbjct: 130 tggcttgcatatctcaggagctt 152
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctct 202
>42700_zma-MIR159k:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tgtttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctct 198
>42699_zma-MIR159j:mirbase
Length = 252
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tgtttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctct 250
>42691_zma-MIR159b:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tgtttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>42634_tae-MIR159a:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tgtttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tgtttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 9 tgtttggattgaagggagctct 30
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tgtttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctct 175
