miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41510_ptc-MIR530b:mirbase
          Length = 172

 Score =  198 bits (100), Expect = 8e-52
 Identities = 136/151 (90%), Gaps = 14/151 (9%)
 Strand = Plus / Minus

                                                                       
Query: 1   cctgcacctgcacctgcacctcaactaagcttattagtttccatatctaacactctatat 60
           ||||||| ||||||||||||||||||||||||||||||||||||||||||          
Sbjct: 156 cctgcacttgcacctgcacctcaactaagcttattagtttccatatctaa---------- 107

                                                                       
Query: 61  ctaattgtcccacatactgtatcgacagaacttgattttgtttgtggagtcaaaaacaaa 120
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 ----ttgtcccacatactgtatcgacagaacttgattttgtttgtggagtcaaaaacaaa 51

                                          
Query: 121 acaaacgcaaaagatgcaggtgcaaatgcag 151
           |||||||||||||||||||||||||||||||
Sbjct: 50  acaaacgcaaaagatgcaggtgcaaatgcag 20




>41509_ptc-MIR530a:mirbase
          Length = 144

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 1   cctgcacctgcacctgcacctcaa 24
           ||||||||||||||||||||||||
Sbjct: 128 cctgcacctgcacctgcacctcaa 105




>41263_csi-MIR530b:mirbase
          Length = 154

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 131 aagatgcaggtgcaaatgcag 151
           |||||||||||||||||||||
Sbjct: 30  aagatgcaggtgcaaatgcag 10




>41205_aqc-MIR530:mirbase
          Length = 142

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 132 agatgcaggtgcaaatgcag 151
           ||||||||||||||||||||
Sbjct: 30  agatgcaggtgcaaatgcag 11