miRNEST 2.0, an integrative microRNA resource :: BLAST
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 77.8 bits (39), Expect = 9e-16
Identities = 68/75 (90%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatggatgacttgcaatgaa-tatgcatctcactcctttgtg 59
|||||||||||||||||||||| |||| ||||||| | | |||||| ||||||||||||
Sbjct: 15 cagaagatagagagcacagatg-atgatatgcaatggactctgcatcccactcctttgtg 73
Query: 60 ctctctatgcttctg 74
|||||||||||||||
Sbjct: 74 ctctctatgcttctg 88
>40337_rco-MIR156h:mirbase
Length = 97
Score = 73.8 bits (37), Expect = 1e-14
Identities = 69/78 (88%), Gaps = 5/78 (6%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatggatgacttgcaatgaatat----gcatctcactccttt 56
|||||||||||||||||||||| |||| |||||||| | | |||||||||||||||
Sbjct: 10 cagaagatagagagcacagatg-atgatgtgcaatgactttttctgcatctcactccttt 68
Query: 57 gtgctctctatgcttctg 74
||||||||||||||||||
Sbjct: 69 gtgctctctatgcttctg 86
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 69.9 bits (35), Expect = 2e-13
Identities = 67/75 (89%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatggatgacttgcaat-gaatatgcatctcactcctttgtg 59
|||||||||||||||||||||| ||| ||||| | || | || ||||||||||||||||
Sbjct: 15 cagaagatagagagcacagatg-atgttttgcagtagactctggatctcactcctttgtg 73
Query: 60 ctctctatgcttctg 74
|||||||||||||||
Sbjct: 74 ctctctatgcttctg 88
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 67.9 bits (34), Expect = 9e-13
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatggatgacttgcaatgaatatgcatctcactcctttgtgc 60
|||||||||||||||||||||| |||| ||||| || |||||||||||||||||||
Sbjct: 15 cagaagatagagagcacagatg-atgaaatgcaaggagccagcatctcactcctttgtgc 73
Query: 61 tctctatgcttctg 74
||||||| ||||||
Sbjct: 74 tctctattcttctg 87
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 67.9 bits (34), Expect = 9e-13
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatggatgacttgcaatgaatatgcatctcactcctttgtgc 60
|||||||||||||||||||||| |||| |||| || | ||||||||||||||||||||
Sbjct: 15 cagaagatagagagcacagatg-atgatgtgcatggagtttgcatctcactcctttgtgc 73
Query: 61 tctcta 66
||||||
Sbjct: 74 tctcta 79
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 67.9 bits (34), Expect = 9e-13
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctctatgcttctg 74
||||||||||||||||||||||||||||||||||
Sbjct: 45 tgcatctcactcctttgtgctctctatgcttctg 78
>41077_gra-MIR157b:mirbase
Length = 91
Score = 61.9 bits (31), Expect = 6e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 40 atgcatctcactcctttgtgctctctatgcttctg 74
||||||| |||||||||||||||||||||||||||
Sbjct: 49 atgcatcccactcctttgtgctctctatgcttctg 83
>41162_aqc-MIR156a:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 2e-10
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatggatgacttgcaatgaatatgcatctcactcctttgtgc 60
||||||||||||||||||||| || || ||||| || | |||||||| | ||||||||
Sbjct: 4 cagaagatagagagcacagat-gacgaattgcatggagtttgcatctcgatactttgtgc 62
Query: 61 tctctatgcttctg 74
||||||||||||||
Sbjct: 63 tctctatgcttctg 76
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 60.0 bits (30), Expect = 2e-10
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatggatgacttgcaatgaatatgcatctcactcctttgtgc 60
|||||||||||||||||||||| |||| |||| || ||||| ||||||||||||||
Sbjct: 25 cagaagatagagagcacagatg-atgagatgcatggagcctgcatttcactcctttgtgc 83
Query: 61 tctctatgcttctg 74
||||||| ||||||
Sbjct: 84 tctctattcttctg 97
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 60.0 bits (30), Expect = 2e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctctatgcttctg 74
||||| ||||||||||||||||||||||||||||
Sbjct: 131 tgcatatcactcctttgtgctctctatgcttctg 164
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 10 cagaagatagagagcacagatg 31
>41076_gra-MIR157a:mirbase
Length = 101
Score = 54.0 bits (27), Expect = 1e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 40 atgcatctcactcctttgtgctctctatgcttctg 74
||||||| |||||||||||||||| ||||||||||
Sbjct: 59 atgcatcccactcctttgtgctctttatgcttctg 93
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 9 cagaagatagagagcacagatg 30
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctcta 66
||||||||||||||||||||||||||
Sbjct: 58 tgcatctcactcctttgtgctctcta 83
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctcta 66
||||||||||||||||||||||||||
Sbjct: 58 tgcatctcactcctttgtgctctcta 83
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 15 cagaagatagagagcacagatg 36
>40428_gma-MIR156d:mirbase
Length = 151
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctctatgcttctg 74
||||||| ||||||||||||||||||| ||||||
Sbjct: 95 tgcatcttactcctttgtgctctctatacttctg 128
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 25 cagaagatagagagcacagatg 46
>40336_rco-MIR156g:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctcta 66
||||||||||||||||||||||||||
Sbjct: 53 tgcatctcactcctttgtgctctcta 78
>39799_aly-MIR157b:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctctatgcttctg 74
||||||| |||||||||||||||||| |||||||
Sbjct: 57 tgcatcttactcctttgtgctctctaagcttctg 90
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 8 cagaagatagagagcacagatg 29
>40429_gma-MIR156e:mirbase
Length = 124
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 42 gcatctcactcctttgtgctctcta 66
|||||||||||||||||||||||||
Sbjct: 69 gcatctcactcctttgtgctctcta 93
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 10 cagaagatagagagcacagatg 31
Score = 42.1 bits (21), Expect = 5e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 42 gcatctcactcctttgtgctctctatgcttctg 74
|||||||| ||||||||||||| ||| ||||||
Sbjct: 54 gcatctcattcctttgtgctctttattcttctg 86
>40011_ath-MIR157b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 23 cagaagatagagagcacagatg 44
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctcta 66
||||||| ||||||||||||||||||
Sbjct: 72 tgcatcttactcctttgtgctctcta 97
>40010_ath-MIR157a:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 8 cagaagatagagagcacagatg 29
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctcta 66
||||||| ||||||||||||||||||
Sbjct: 57 tgcatcttactcctttgtgctctcta 82
>39798_aly-MIR157a:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 20 cagaagatagagagcacagatg 41
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctcta 66
||||||| ||||||||||||||||||
Sbjct: 69 tgcatcttactcctttgtgctctcta 94
>41525_sly-MIR156a:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tttgtgctctctatgcttctg 74
|||||||||||||||||||||
Sbjct: 76 tttgtgctctctatgcttctg 96
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 tcctttgtgctctctatgcttctg 74
|||||||||||||||| |||||||
Sbjct: 86 tcctttgtgctctctaagcttctg 109
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 tcctttgtgctctctatgcttctg 74
|||||||||||||||| |||||||
Sbjct: 86 tcctttgtgctctctaagcttctg 109
>40013_ath-MIR157d:mirbase
Length = 221
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 tcctttgtgctctctatgcttctg 74
|||| |||||||||||||||||||
Sbjct: 167 tcctatgtgctctctatgcttctg 190
>39801_aly-MIR157d:mirbase
Length = 256
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 tcctttgtgctctctatgcttctg 74
|||| |||||||||||||||||||
Sbjct: 185 tcctatgtgctctctatgcttctg 208
>39727_smo-MIR156b:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacaga 20
||||||||||||||||||||
Sbjct: 15 cagaagatagagagcacaga 34
>40431_gma-MIR156g:mirbase
Length = 118
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacag 19
|||||||||||||||||||
Sbjct: 28 cagaagatagagagcacag 46
>40012_ath-MIR157c:mirbase
Length = 217
Score = 38.2 bits (19), Expect = 8e-04
Identities = 32/35 (91%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 41 tgcatctc-actcctttgtgctctctatgcttctg 74
|||||||| |||| |||||||||||||| ||||||
Sbjct: 151 tgcatctctactcttttgtgctctctatacttctg 185
>39800_aly-MIR157c:mirbase
Length = 293
Score = 38.2 bits (19), Expect = 8e-04
Identities = 32/35 (91%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 41 tgcatctc-actcctttgtgctctctatgcttctg 74
|||||||| |||| |||||||||||||| ||||||
Sbjct: 202 tgcatctctactcttttgtgctctctatacttctg 236
