miRNEST 2.0, an integrative microRNA resource :: BLAST
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 131 bits (66), Expect = 8e-32
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 12 gcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgtggatg 71
Query: 61 gcgtatgaggagccatgc 78
||||||||||||||||||
Sbjct: 72 gcgtatgaggagccatgc 89
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 131 bits (66), Expect = 8e-32
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccatttgcagagcccaccggttcttcgatggcctccgtggatg 71
Query: 61 gcgtatgaggagccatgc 78
||||||||||||||||||
Sbjct: 72 gcgtatgaggagccatgc 89
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 131 bits (66), Expect = 8e-32
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccatttgcagagcccaacggatcctcgatggcctccgtggatg 71
Query: 61 gcgtatgaggagccatgc 78
||||||||||||||||||
Sbjct: 72 gcgtatgaggagccatgc 89
>41219_csi-MIR160:mirbase
Length = 143
Score = 115 bits (58), Expect = 5e-27
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
||||||||||||||||||||||||||||| | | || | |||||||||||||||||||||
Sbjct: 34 gcctggctccctgtatgccatttgcagagtcaatcgaaacatcgatggcctccgtggatg 93
Query: 61 gcgtatgaggagccatgc 78
||||||||||||||||||
Sbjct: 94 gcgtatgaggagccatgc 111
>40019_ath-MIR160a:mirbase
Length = 85
Score = 99.6 bits (50), Expect = 3e-22
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
||||||||||||||||||||| ||| ||||||| || || ||||||| ||||||||||||
Sbjct: 5 gcctggctccctgtatgccatatgctgagcccatcg-agtatcgatgacctccgtggatg 63
Query: 61 gcgtatgaggagccatgc 78
||||||||||||||||||
Sbjct: 64 gcgtatgaggagccatgc 81
>39807_aly-MIR160a:mirbase
Length = 158
Score = 91.7 bits (46), Expect = 7e-20
Identities = 71/78 (91%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
||||||||||||||||||||| ||| |||| || || || ||||||| ||||||||||||
Sbjct: 43 gcctggctccctgtatgccatatgctgagctcatcg-agtatcgatgacctccgtggatg 101
Query: 61 gcgtatgaggagccatgc 78
||||||||||||||||||
Sbjct: 102 gcgtatgaggagccatgc 119
>40436_gma-MIR160:mirbase
Length = 119
Score = 85.7 bits (43), Expect = 4e-18
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
|||||||||||||||||||||||| ||||| || || |||||| ||| ||| |||||||
Sbjct: 22 gcctggctccctgtatgccatttgtagagctcatcgaagcatcaatgacctttgtggatg 81
Query: 61 gcgtatgaggagcca 75
|||||||||||||||
Sbjct: 82 gcgtatgaggagcca 96
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
|||||||||||||||||||||||||| || ||||| ||| || | | |||| || |||||
Sbjct: 12 gcctggctccctgtatgccatttgcaaagtccacccgaggattggtagccttcgcggatg 71
Query: 61 gcgtatgaggagccatgc 78
|||| ||||||||||||
Sbjct: 72 gcgtgcgaggagccatgc 89
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 58.0 bits (29), Expect = 9e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagccca 33
|||||||||||||||||||||||||| ||||||
Sbjct: 22 gcctggctccctgtatgccatttgcaaagccca 54
>41529_sly-MIR160a:mirbase
Length = 129
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccg 36
|||||||||||||||||||||||||| ||| |||||
Sbjct: 21 gcctggctccctgtatgccatttgcaaagctcaccg 56
>40312_bra-MIR160a:mirbase
Length = 127
Score = 54.0 bits (27), Expect = 1e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 44 gatggcctccgtggatggcgtatgaggagccatgc 78
|||| |||||||| |||||||||||||||||||||
Sbjct: 69 gatgacctccgtgaatggcgtatgaggagccatgc 103
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgc 25
|||||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccatttgc 26
Score = 38.2 bits (19), Expect = 9e-04
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 44 gatggcctccgtggatggcgtatgaggagccatgc 78
|||||||| ||||||||||| ||||||||||||
Sbjct: 45 gatggcctttgtggatggcgtgcgaggagccatgc 79
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagag 29
|||||||||||||||||||||||| ||||
Sbjct: 7 gcctggctccctgtatgccatttgtagag 35
>40658_mtr-MIR160:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagag 29
|||||||||||||||||||||||| ||||
Sbjct: 22 gcctggctccctgtatgccatttgtagag 50
>41312_ptc-MIR160h:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 9e-07
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
||||||||||||| |||||||||||| ||| || | || | ||| |||||| |||||||
Sbjct: 12 gcctggctccctgcatgccatttgcatagctcatcagaacgtcggtggccttggtggatg 71
Query: 61 gcgt 64
||||
Sbjct: 72 gcgt 75
>40339_rco-MIR160a:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttg 24
||||||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgccatttg 30
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 gtggatggcgtatgaggagcca 75
||||||||||||||||||||||
Sbjct: 60 gtggatggcgtatgaggagcca 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgccat 27
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 gtggatggcgtatgaggagcca 75
||||||||||||||||||||||
Sbjct: 60 gtggatggcgtatgaggagcca 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgccat 27
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccat 32
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgc 25
|||||||||||||||||||| ||||
Sbjct: 31 gcctggctccctgtatgccacttgc 55
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 21 gcctggctccctgtatgccat 41
>42707_zma-MIR160g:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 3 gcctggctccctgtatgcca 22
>42705_zma-MIR160e:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 10 gcctggctccctgtatgcca 29
>42704_zma-MIR160d:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgcca 41
>42703_zma-MIR160c:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 8 gcctggctccctgtatgcca 27
>42702_zma-MIR160b:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgcca 41
>42701_zma-MIR160a:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 11 gcctggctccctgtatgcca 30
>42677_ttu-MIR160:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 10 gcctggctccctgtatgcca 29
>42636_tae-MIR160:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 23 gcctggctccctgtatgcca 42
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>41926_osa-MIR160d:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 9 gcctggctccctgtatgcca 28
>41925_osa-MIR160c:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 8 gcctggctccctgtatgcca 27
>41924_osa-MIR160b:mirbase
Length = 139
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>41923_osa-MIR160a:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgcca 24
>41869_far-MIR160:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 54 gcctggctccctgtatgcca 73
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 32 gcctggctccctgtatgcca 51
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 32 gcctggctccctgtatgcca 51
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 32 gcctggctccctgtatgcca 51
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 33 gcctggctccctgtatgcca 52
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>40340_rco-MIR160b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgcca 26
>40021_ath-MIR160c:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgcca 25
>40020_ath-MIR160b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgcca 25
>39809_aly-MIR160c:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 25 gcctggctccctgtatgcca 44
>39808_aly-MIR160b:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgcca 41
>39732_smo-MIR160b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 14 gcctggctccctgtatgcca 33
>39463_ppt-MIR160i:mirbase
Length = 139
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>39456_ppt-MIR160b:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>39374_pab-MIR160a:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 15 gcctggctccctgtatgcca 34
