miRNEST 2.0, an integrative microRNA resource :: BLAST
>40311_bra-MIR159a:mirbase
Length = 185
Score = 353 bits (178), Expect = 3e-98
Identities = 178/178 (100%)
Strand = Plus / Plus
Query: 1 agggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 agggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatga 64
Query: 61 atcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 atcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctc 124
Query: 121 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 182
>40261_bna-MIR159:mirbase
Length = 183
Score = 353 bits (178), Expect = 3e-98
Identities = 178/178 (100%)
Strand = Plus / Plus
Query: 1 agggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 agggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatga 62
Query: 61 atcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctc 122
Query: 121 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 180
>39804_aly-MIR159a:mirbase
Length = 222
Score = 262 bits (132), Expect = 8e-71
Identities = 167/178 (93%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 4 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 63
||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 25 gctccttgaagttcaaacgagagttgagcagggtaaagaaaagctgctaagctatggatc 84
Query: 64 ccataagccctaatccttata---tataaaaaggatttggttatatggcttacatatctc 120
||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||
Sbjct: 85 ccataagccctaatccttataaagaaaaaaaaggatttggttatatggcttgcatatctc 144
Query: 121 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 178
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 145 aggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctct 202
>40016_ath-MIR159a:mirbase
Length = 184
Score = 242 bits (122), Expect = 7e-65
Identities = 164/177 (92%), Gaps = 2/177 (1%)
Strand = Plus / Plus
Query: 4 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 63
|||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||
Sbjct: 6 gctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctatggatc 65
Query: 64 ccataagccctaatccttatatat--aaaaaggatttggttatatggcttacatatctca 121
|||||||||||||||||| || | ||||||||||||||||||||| || |||||||||
Sbjct: 66 ccataagccctaatccttgtaaagtaaaaaaggatttggttatatggattgcatatctca 125
Query: 122 ggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 178
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 126 ggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctct 182
>39805_aly-MIR159b:mirbase
Length = 202
Score = 85.7 bits (43), Expect = 1e-17
Identities = 146/176 (82%), Gaps = 7/176 (3%)
Strand = Plus / Plus
Query: 4 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 63
||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||| |||
Sbjct: 19 gctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatggatc 78
Query: 64 ccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctcagg 123
|||||| || || | || | || ||||||| || ||||| || |||||||||||
Sbjct: 79 ccataaacctta--tcaaattcaaaataaggatt---ttttatggattccatatctcagg 133
Query: 124 agctttaactt-gccctttaattgcttttactcttctttggattgaagggagctct 178
|||||| |||| ||||||||| || || |||||||||||||||||||||||||||
Sbjct: 134 agctttcacttacccctttaatggc-ttcactcttctttggattgaagggagctct 188
>40017_ath-MIR159b:mirbase
Length = 196
Score = 73.8 bits (37), Expect = 4e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 4 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 63
||||||| ||||||| ||| |||||||||||| ||| ||||||||||||||||| |||
Sbjct: 7 gctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatggatc 66
Query: 64 ccataagcc 72
|||||||||
Sbjct: 67 ccataagcc 75
Score = 69.9 bits (35), Expect = 6e-13
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 113 catatctcaggagctttaacttgccc-tttaattgcttttactcttctttggattgaagg 171
||||||||||||||||| |||| ||| |||||| |||| ||||||||||||||||||||
Sbjct: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
Query: 172 gagctct 178
|||||||
Sbjct: 181 gagctct 187
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 155 cttctttggattgaagggagctct 178
||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 155 cttctttggattgaagggagctct 178
||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctct 172
>40432_gma-MIR159a:mirbase
Length = 214
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 155 cttctttggattgaagggagctct 178
||||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctct 194
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 ttctttggattgaagggagctct 178
|||||||||||||||||||||||
Sbjct: 149 ttctttggattgaagggagctct 171
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42690_zma-MIR159a:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>42635_tae-MIR159b:mirbase
Length = 255
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>42494_sbi-MIR159:mirbase
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctct 223
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 221 tctttggattgaagggagctct 242
>42455_sof-MIR159d:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>42453_sof-MIR159b:mirbase
Length = 266
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>42452_sof-MIR159a:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>41918_osa-MIR159b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>41917_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41868_far-MIR159:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 167 tctttggattgaagggagctct 188
>42700_zma-MIR159k:mirbase
Length = 200
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 tttggattgaagggagctct 178
||||||||||||||||||||
Sbjct: 179 tttggattgaagggagctct 198
>42699_zma-MIR159j:mirbase
Length = 252
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 tttggattgaagggagctct 178
||||||||||||||||||||
Sbjct: 231 tttggattgaagggagctct 250
>42691_zma-MIR159b:mirbase
Length = 221
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 tttggattgaagggagctct 178
||||||||||||||||||||
Sbjct: 182 tttggattgaagggagctct 201
>42634_tae-MIR159a:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 tttggattgaagggagctct 178
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 tttggattgaagggagctct 178
||||||||||||||||||||
Sbjct: 11 tttggattgaagggagctct 30
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 tttggattgaagggagctct 178
||||||||||||||||||||
Sbjct: 156 tttggattgaagggagctct 175
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 tttggattgaagggagctct 178
||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctct 179
>41528_sly-MIR159:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 tttggattgaagggagctct 178
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 107 ggcttacatatctcaggagcttta 130
||||| ||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 tttggattgaagggagctct 178
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
