miRNEST 2.0, an integrative microRNA resource :: BLAST
>39804_aly-MIR159a:mirbase
Length = 222
Score = 276 bits (139), Expect = 5e-75
Identities = 173/183 (94%), Gaps = 1/183 (0%)
Strand = Plus / Plus
Query: 1 tagagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatg 60
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 21 tagagctccttgaagttcaaacgagagttgagcagggtaaagaaaagctgctaagctatg 80
Query: 61 gatcccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcata 119
||||||||||||||||| ||||| | | | ||||| | |||||||||||||||||||||
Sbjct: 81 gatcccataagccctaatccttataaagaaaaaaaaggatttggttatatggcttgcata 140
Query: 120 tctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagct 200
Query: 180 cta 182
|||
Sbjct: 201 cta 203
>40311_bra-MIR159a:mirbase
Length = 185
Score = 254 bits (128), Expect = 2e-68
Identities = 169/179 (94%), Gaps = 4/179 (2%)
Strand = Plus / Plus
Query: 5 gctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatggatc 64
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 8 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 67
Query: 65 ccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcatatctc 123
||||||||||||| ||||| | ||| |||||||||| ||||||||||||| ||||||||
Sbjct: 68 ccataagccctaatccttatatata--aaaaggattt-ggttatatggcttacatatctc 124
Query: 124 aggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctcta 182
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 125 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctcta 183
>40261_bna-MIR159:mirbase
Length = 183
Score = 254 bits (128), Expect = 2e-68
Identities = 169/179 (94%), Gaps = 4/179 (2%)
Strand = Plus / Plus
Query: 5 gctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatggatc 64
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 6 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 65
Query: 65 ccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcatatctc 123
||||||||||||| ||||| | ||| |||||||||| ||||||||||||| ||||||||
Sbjct: 66 ccataagccctaatccttatatata--aaaaggattt-ggttatatggcttacatatctc 122
Query: 124 aggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctcta 182
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 123 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctcta 181
>40016_ath-MIR159a:mirbase
Length = 184
Score = 252 bits (127), Expect = 8e-68
Identities = 171/183 (93%), Gaps = 2/183 (1%)
Strand = Plus / Plus
Query: 1 tagagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatg 60
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2 tagagctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctatg 61
Query: 61 gatcccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcata 119
||||||||||||||||| |||| | | ||||||||||| |||||||||| |||||||
Sbjct: 62 gatcccataagccctaatccttgtaaagtaaaaaaggattt-ggttatatggattgcata 120
Query: 120 tctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagct 180
Query: 180 cta 182
|||
Sbjct: 181 cta 183
>39805_aly-MIR159b:mirbase
Length = 202
Score = 115 bits (58), Expect = 1e-26
Identities = 153/181 (84%), Gaps = 9/181 (4%)
Strand = Plus / Plus
Query: 2 agagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgg 61
|||||||||| |||||||| ||| |||||||||||||||| ||||||||||||||||||
Sbjct: 16 agagctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatgg 75
Query: 62 atcccataagccctaaccttaaacatagaaaaaggattttggttatatggcttgcatatc 121
||||||||| || || | ||| | || ||||||| || ||||| || ||||||
Sbjct: 76 atcccataaacctta---tcaaattcaaaataaggatt----ttttatggattccatatc 128
Query: 122 tcaggagctttaactt-gccctttaatggcttttactcttctttggattgaagggagctc 180
||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||||
Sbjct: 129 tcaggagctttcacttacccctttaatggc-ttcactcttctttggattgaagggagctc 187
Query: 181 t 181
|
Sbjct: 188 t 188
>40017_ath-MIR159b:mirbase
Length = 196
Score = 95.6 bits (48), Expect = 1e-20
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 2 agagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgg 61
|||||||||| |||||||| ||| |||||||||||| ||| ||||||||||||||||||
Sbjct: 4 agagctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatgg 63
Query: 62 atcccataagcc 73
||||||||||||
Sbjct: 64 atcccataagcc 75
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 158 cttctttggattgaagggagctcta 182
|||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctcta 173
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 158 cttctttggattgaagggagctcta 182
|||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctcta 173
>40432_gma-MIR159a:mirbase
Length = 214
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 158 cttctttggattgaagggagctcta 182
|||||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctcta 195
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 ggcttgcatatctcaggagcttta 133
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 45 aagctgctaagctatggatcc 65
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 ggcttgcatatctcaggagcttta 133
||||||||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 ggcttgcatatctcaggagcttta 133
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 45 aagctgctaagctatggatcc 65
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 159 ttctttggattgaagggagctcta 182
||||||||||||||||||||||||
Sbjct: 149 ttctttggattgaagggagctcta 172
>40338_rco-MIR159:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 109 tggcttgcatatctcaggagctt 131
|||||||||||||||||||||||
Sbjct: 109 tggcttgcatatctcaggagctt 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctcta 175
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42690_zma-MIR159a:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>42635_tae-MIR159b:mirbase
Length = 255
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>42494_sbi-MIR159:mirbase
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctct 223
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 221 tctttggattgaagggagctct 242
>42455_sof-MIR159d:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>42453_sof-MIR159b:mirbase
Length = 266
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>42452_sof-MIR159a:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>41918_osa-MIR159b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>41917_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41868_far-MIR159:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 167 tctttggattgaagggagctct 188
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 109 tggcttgcatatctcaggagct 130
||||||||||||||||||||||
Sbjct: 114 tggcttgcatatctcaggagct 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctcta 180
>40397_ahy-MIR159:mirbase
Length = 197
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 46 agctgctaagctatggatccca 67
||||||||||||||||||||||
Sbjct: 47 agctgctaagctatggatccca 68
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>41528_sly-MIR159:mirbase
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>41218_csi-MIR159:mirbase
Length = 216
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctcta 206
