miRNEST 2.0, an integrative microRNA resource :: BLAST
>40397_ahy-MIR159:mirbase
Length = 197
Score = 331 bits (167), Expect = 1e-91
Identities = 170/171 (99%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5 gagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatggat 64
Query: 61 cccacagtactacccatatataccccattatgcagtggtagttctgcggattccatatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cccacagtactacccatatataccccattatgcagtggtagttctgcggattccatatcc 124
Query: 121 tgggagcttcattacctttccacagatccttatttggattgaagggagctc 171
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tgggagcttcattacctttccacagatccttatttggattgaagggagctc 175
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 97.6 bits (49), Expect = 3e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||| |||| |||| |||||||||||||||||| ||||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacagtactacccat 77
|||||||| ||||||||
Sbjct: 64 cccacagttctacccat 80
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 146 atccttatttggattgaagggagctc 171
|||||| |||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctc 171
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 97.6 bits (49), Expect = 3e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||| |||| |||| |||||||||||||||||| ||||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacagtactacccat 77
|||||||| ||||||||
Sbjct: 64 cccacagttctacccat 80
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 146 atccttatttggattgaagggagctc 171
|||||| |||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctc 171
>40338_rco-MIR159:mirbase
Length = 180
Score = 93.7 bits (47), Expect = 4e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||| ||||| ||||| ||||| |||||||||||| ||||||||||
Sbjct: 6 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 65
Query: 61 cccacag 67
|||||||
Sbjct: 66 cccacag 72
Score = 50.1 bits (25), Expect = 5e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 123 ggagcttcattacctttccacagatccttatttggattgaagggagctc 171
|||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 125 ggagcttcattaccttgtattagatccttgtttggattgaagggagctc 173
>40432_gma-MIR159a:mirbase
Length = 214
Score = 89.7 bits (45), Expect = 6e-19
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||| |||| |||| |||||| ||||||||||| ||||||||||
Sbjct: 23 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 82
Query: 61 cccacagtactacccat 77
|||||||| ||||||||
Sbjct: 83 cccacagttctacccat 99
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 148 ccttatttggattgaagggagctc 171
|||| |||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctc 193
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 83.8 bits (42), Expect = 4e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||| ||||| ||||| ||||| |||| ||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 144 agatccttatttggattgaagggagctc 171
|||||| | |||||||||||||||||||
Sbjct: 145 agatccctttttggattgaagggagctc 172
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 83.8 bits (42), Expect = 4e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||| ||||| ||||| ||||| |||| ||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 144 agatccttatttggattgaagggagctc 171
|||||| | |||||||||||||||||||
Sbjct: 145 agatccctttttggattgaagggagctc 172
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 77.8 bits (39), Expect = 2e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||| |||||||||| ||||| |||||||||||| | |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 cccacag 67
|||||||
Sbjct: 71 cccacag 77
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 144 agatccttatttggattgaagggagctc 171
|||||||| |||||||||||||||||||
Sbjct: 151 agatccttgtttggattgaagggagctc 178
>40435_gma-MIR159d:mirbase
Length = 103
Score = 65.9 bits (33), Expect = 9e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 33 gggtggattgagctgctaagctatggatcccacagtactacccat 77
||||| ||||||||||| |||||||||||||||||| ||||||||
Sbjct: 1 gggtgaattgagctgcttagctatggatcccacagttctacccat 45
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 61.9 bits (31), Expect = 1e-10
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||| ||| | || || ||||| ||| |||||||| ||||||| ||
Sbjct: 13 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 72
Query: 61 cccacag 67
|||||||
Sbjct: 73 cccacag 79
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 144 agatccttatttggattgaagggagctc 171
||||| || |||||||||||||||||||
Sbjct: 149 agatctttttttggattgaagggagctc 176
>41218_csi-MIR159:mirbase
Length = 216
Score = 58.0 bits (29), Expect = 2e-09
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggt-gggtggattgagctgctaagctatgga 59
|||||||||||||||||| ||||| ||| | |||| ||||||||||| |||||||||
Sbjct: 14 gagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgga 73
Query: 60 tcccacagt 68
|||||||||
Sbjct: 74 tcccacagt 82
>40017_ath-MIR159b:mirbase
Length = 196
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 43 agctgctaagctatggatccca 64
||||||||||||||||||||||
Sbjct: 48 agctgctaagctatggatccca 69
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 43 agctgctaagctatggatccca 64
||||||||||||||||||||||
Sbjct: 47 agctgctaagctatggatccca 68
>39805_aly-MIR159b:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 43 agctgctaagctatggatccca 64
||||||||||||||||||||||
Sbjct: 60 agctgctaagctatggatccca 81
>39804_aly-MIR159a:mirbase
Length = 222
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 43 agctgctaagctatggatccca 64
||||||||||||||||||||||
Sbjct: 66 agctgctaagctatggatccca 87
>41528_sly-MIR159:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaaca 20
||||||||||||||||||||
Sbjct: 3 gagctccttgaagtccaaca 22
