miRNEST 2.0, an integrative microRNA resource :: BLAST
>40464_gma-MIR319a:mirbase
Length = 207
Score = 206 bits (104), Expect = 4e-54
Identities = 154/168 (91%), Gaps = 2/168 (1%)
Strand = Plus / Plus
Query: 3 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 62
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 23 gagctttcttcagtccactcatgggtgacagtaagattcaattagctgccgactcattca 82
Query: 63 tccaaatgctgagtagtgatactcttaaagatactcatcaaatgagtgaatgatgcggga 122
|||||||| ||||| || | | |||| ||||||| || |||||||||||||||||||
Sbjct: 83 tccaaatgttgagt-gtaag-cgaataaatatactcagcagatgagtgaatgatgcggga 140
Query: 123 gacaaattgattcttaagtttcctgtacttggactgaagggagctccc 170
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 141 gacaaattgaatcttaagtttcctgtacttggactgaagggagctccc 188
>40465_gma-MIR319b:mirbase
Length = 208
Score = 198 bits (100), Expect = 1e-51
Identities = 155/170 (91%), Gaps = 5/170 (2%)
Strand = Plus / Plus
Query: 3 gagctttcttcagtccactcataggtggcagtaagatt-caattagctgccgactcattc 61
||||||||||||||||||| || |||| || ||||||| |||||||||||||||||||||
Sbjct: 23 gagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgactcattc 82
Query: 62 atccaaatgctgagtagtgata-ctcttaaagatactcatcaaatgagtgaatgatgcgg 120
||||||||||||||| || | | ||||||||||| ||||||||||||||||||||
Sbjct: 83 atccaaatgctgagt---gaaagcgaagaaagatactcagcaaatgagtgaatgatgcgg 139
Query: 121 gagacaaattgattcttaagtttcctgtacttggactgaagggagctccc 170
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gagacaaattgattcttaagtttcctgtacttggactgaagggagctccc 189
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 163 bits (82), Expect = 5e-41
Identities = 150/170 (88%), Gaps = 2/170 (1%)
Strand = Plus / Plus
Query: 3 gagctttcttcagtccactcataggtggcagtaagatt-caattagctgccgactcattc 61
|||||||||| ||||||||||| |||| || ||||||| ||||||||||| |||||||||
Sbjct: 6 gagctttctttagtccactcatgggtgacaataagatttcaattagctgctgactcattc 65
Query: 62 atccaaatgctgagtagtg-atactcttaaagatactcatcaaatgagtgaatgatgcgg 120
||||||||| |||||| ||| | | ||||||||||||||||||||||||||||
Sbjct: 66 atccaaatgttgagtaaaatatatagaaacatatactcatcaaatgagtgaatgatgcgg 125
Query: 121 gagacaaattgattcttaagtttcctgtacttggactgaagggagctccc 170
|||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 126 gagacaaattgaatcttaagtttcctatacttggactgaagggagctccc 175
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 139 bits (70), Expect = 8e-34
Identities = 146/169 (86%), Gaps = 3/169 (1%)
Strand = Plus / Plus
Query: 3 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 62
|||||||||||||||||||||| ||||| |||| |||| |||||||||||||||||||||
Sbjct: 13 gagctttcttcagtccactcatgggtggtagtaggatttaattagctgccgactcattca 72
Query: 63 tccaaatgctgagtagtgatactcttaaagat-actcatcaaatgagtgaatgatgcggg 121
||||||| |||||| | | | |||| || || ||||||||||||||||||||
Sbjct: 73 tccaaatactgagt--taaaggacaaggagattacccagtaaatgagtgaatgatgcggg 130
Query: 122 agacaaattgattcttaagtttcctgtacttggactgaagggagctccc 170
||||||||||| || |||| |||||||||||||||||||||||||||||
Sbjct: 131 agacaaattgaatcctaagcttcctgtacttggactgaagggagctccc 179
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 125 bits (63), Expect = 1e-29
Identities = 142/169 (84%), Gaps = 12/169 (7%)
Strand = Plus / Plus
Query: 3 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 62
|||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||
Sbjct: 13 gagctttcttcagtccactcatgggtggcagtaggattgaattagctgccgactcattca 72
Query: 63 tccaaatgctgagtagtgatactcttaaaga-tactcatcaaatgagtgaatgatgcggg 121
||||||| ||| | |||| || ||| || |||||| |||||||||||||
Sbjct: 73 tccaaatactg-----------tgttaaggactacccagtaaatgattgaatgatgcggg 121
Query: 122 agacaaattgattcttaagtttcctgtacttggactgaagggagctccc 170
|||||||||| ||||||| | ||||| |||||||||||||||||||||
Sbjct: 122 agacaaattggatcttaagctccctgtgcttggactgaagggagctccc 170
>41282_ctr-MIR319:mirbase
Length = 186
Score = 123 bits (62), Expect = 5e-29
Identities = 144/169 (85%), Gaps = 3/169 (1%)
Strand = Plus / Plus
Query: 3 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 62
||||||||||| ||||||| || ||||||| || |||| |||||||||| ||||||||||
Sbjct: 10 gagctttcttcggtccacttatgggtggcaataggatttaattagctgctgactcattca 69
Query: 63 tccaaatgctgagtagtgatactcttaaag-atactcatcaaatgagtgaatgatgcggg 121
||||||| || |||| | || || | |||| || ||||||||||||||||||||
Sbjct: 70 tccaaatacttagtaaaggg--tcgaaatggatacccagtaaatgagtgaatgatgcggg 127
Query: 122 agacaaattgattcttaagtttcctgtacttggactgaagggagctccc 170
||||||||||| ||||||| ||||||| |||||||||||||||||||||
Sbjct: 128 agacaaattgaatcttaagcttcctgtgcttggactgaagggagctccc 176
>40367_rco-MIR319a:mirbase
Length = 211
Score = 121 bits (61), Expect = 2e-28
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 102 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 161
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 137 aaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtacttggactgaag 196
Query: 162 ggagctccc 170
|||||||||
Sbjct: 197 ggagctccc 205
Score = 107 bits (54), Expect = 3e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 3 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 62
|||||||||||||||||||||| |||||| ||| |||| |||||||||||||||||||||
Sbjct: 7 gagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactcattca 66
Query: 63 tccaaatgctgagt 76
||||||| ||||||
Sbjct: 67 tccaaatactgagt 80
>41185_aqc-MIR319:mirbase
Length = 177
Score = 87.7 bits (44), Expect = 3e-18
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 3 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 62
||||| |||||||||||||||||||| | ||| |||||||||| ||||||||||||||||
Sbjct: 4 gagctctcttcagtccactcataggtagtagtcagattcaatttgctgccgactcattca 63
Query: 63 tcca 66
||||
Sbjct: 64 tcca 67
Score = 65.9 bits (33), Expect = 9e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 102 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 161
|||||| |||||||| ||||||| ||||| ||||| | ||| ||||||||||||||||
Sbjct: 106 aaatgaatgaatgatccgggagattaattggatcttatgcttcttgtacttggactgaag 165
Query: 162 ggagctccc 170
|||||||||
Sbjct: 166 ggagctccc 174
>41544_sly-MIR319:mirbase
Length = 168
Score = 77.8 bits (39), Expect = 2e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 96 ctcatcaaatgagtgaatgatgcgggag-acaaattgattcttaagtttcctgtacttgg 154
|||| ||| ||||||||||| ||||||| |||| |||| |||| || |||||||||||||
Sbjct: 94 ctcagcaactgagtgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttgg 153
Query: 155 actgaagggagctcc 169
|||||||||||||||
Sbjct: 154 actgaagggagctcc 168
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 65.9 bits (33), Expect = 9e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 102 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 161
|||||| ||| |||||||||||||||||| | |||||| ||||| | |||||||||||
Sbjct: 108 aaatgaatgagtgatgcgggagacaaattaaatcttaaacttcctatcattggactgaag 167
Query: 162 ggagctccc 170
|||||||||
Sbjct: 168 ggagctccc 176
>40070_ath-MIR319b:mirbase
Length = 172
Score = 65.9 bits (33), Expect = 9e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 102 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 161
|||||| ||||||||||| |||||||||||| |||| | || || | ||||||||||||
Sbjct: 103 aaatgaatgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaag 162
Query: 162 ggagctccc 170
|||||||||
Sbjct: 163 ggagctccc 171
>39859_aly-MIR319b:mirbase
Length = 246
Score = 65.9 bits (33), Expect = 9e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 102 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 161
|||||| ||||||||||| |||||||||||| |||| | || || | ||||||||||||
Sbjct: 142 aaatgaatgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaag 201
Query: 162 ggagctccc 170
|||||||||
Sbjct: 202 ggagctccc 210
>40069_ath-MIR319a:mirbase
Length = 176
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 37 gattcaattagctgccgactcattcatccaaat 69
||||||||||||| |||||||||||||||||||
Sbjct: 40 gattcaattagcttccgactcattcatccaaat 72
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 ttggactgaagggagctccc 170
||||||||||||||||||||
Sbjct: 154 ttggactgaagggagctccc 173
>39858_aly-MIR319a:mirbase
Length = 221
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 41 caattagctgccgactcattcatccaaat 69
||||||||| |||||||||||||||||||
Sbjct: 67 caattagcttccgactcattcatccaaat 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 102 aaatgagtgaatgatgcgggagacaaattg 131
|||||| |||||||||||| ||||||||||
Sbjct: 128 aaatgaatgaatgatgcggtagacaaattg 157
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 ttggactgaagggagctccc 170
||||||||||||||||||||
Sbjct: 177 ttggactgaagggagctccc 196
>42781_zma-MIR319b:mirbase
Length = 213
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 aattagctgccgactcattcatccaaatgc 71
||||||||||||||||||||| ||| ||||
Sbjct: 63 aattagctgccgactcattcacccacatgc 92
>42563_sbi-MIR319:mirbase
Length = 249
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 aattagctgccgactcattcatccaaatgc 71
||||||||||||||||||||| ||| ||||
Sbjct: 75 aattagctgccgactcattcacccacatgc 104
>41995_osa-MIR319b:mirbase
Length = 197
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 aattagctgccgactcattcatccaaatgc 71
||||||||||||||||||||| ||| ||||
Sbjct: 53 aattagctgccgactcattcacccacatgc 82
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 43 attagctgccgactcattcatccaaa 68
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 145 ctgtacttggactgaagggagctccc 170
|||| |||||||||||||||||||||
Sbjct: 156 ctgtgcttggactgaagggagctccc 181
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 42 aattagctgccgactcattcat 63
||||||||||||||||||||||
Sbjct: 55 aattagctgccgactcattcat 76
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 145 ctgtacttggactgaagggagctcc 169
|||| ||||||||||||||||||||
Sbjct: 168 ctgtgcttggactgaagggagctcc 192
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 43 attagctgccgactcattcatccaaa 68
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 145 ctgtacttggactgaagggagctccc 170
|||| |||||||||||||||||||||
Sbjct: 159 ctgtgcttggactgaagggagctccc 184
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3 gagctttcttcagtccactcat 24
||||||||||||||||||||||
Sbjct: 13 gagctttcttcagtccactcat 34
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 43 attagctgccgactcattcatccaaa 68
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 145 ctgtacttggactgaagggagctccc 170
|||| |||||||||||||||||||||
Sbjct: 162 ctgtgcttggactgaagggagctccc 187
>40369_rco-MIR319c:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 145 ctgtacttggactgaagggagctccc 170
|||| |||||||||||||||||||||
Sbjct: 157 ctgtgcttggactgaagggagctccc 182
>42783_zma-MIR319d:mirbase
Length = 212
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 43 attagctgccgactcattcatccaaatgc 71
|||||||||||||||||||| ||| ||||
Sbjct: 63 attagctgccgactcattcacccacatgc 91
>42642_tae-MIR319:mirbase
Length = 211
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 150 cttggactgaagggagctccc 170
|||||||||||||||||||||
Sbjct: 183 cttggactgaagggagctccc 203
>41770_bdi-MIR319:mirbase
Length = 280
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 150 cttggactgaagggagctccc 170
|||||||||||||||||||||
Sbjct: 225 cttggactgaagggagctccc 245
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 150 cttggactgaagggagctccc 170
|||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctccc 182
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 145 ctgtacttggactgaagggagctcc 169
|||| ||||||||||||||||||||
Sbjct: 170 ctgtgcttggactgaagggagctcc 194
>40703_mtr-MIR319:mirbase
Length = 207
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 150 cttggactgaagggagctccc 170
|||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctccc 188
>40368_rco-MIR319b:mirbase
Length = 179
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 150 cttggactgaagggagctccc 170
|||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctccc 173
>39740_smo-MIR319:mirbase
Length = 215
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 150 cttggactgaagggagctccc 170
|||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccc 205
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 150 cttggactgaagggagctccc 170
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 150 cttggactgaagggagctccc 170
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 150 cttggactgaagggagctccc 170
|||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174
>41639_vvi-MIR319g:mirbase
Length = 222
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 ttggactgaagggagctccc 170
||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 cttggactgaagggagctcc 169
||||||||||||||||||||
Sbjct: 409 cttggactgaagggagctcc 428
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 cttggactgaagggagctcc 169
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 cttggactgaagggagctcc 169
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
