miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42653_tae-MIR1120:mirbase
          Length = 119

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                            
Query: 50 caaaaatgctcttatattatgggacggagggagt 83
          |||||||| |||||||||||||||||||||||||
Sbjct: 52 caaaaatgttcttatattatgggacggagggagt 19



 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 1  actccctccgttccataatataagaacgttttt 33
          ||||||||||| ||||||||||||||| |||||
Sbjct: 19 actccctccgtcccataatataagaacattttt 51



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 59 tcttatattatgggacggagggagt 83
          |||||||||||| ||||||||||||
Sbjct: 74 tcttatattatgagacggagggagt 98




>42167_osa-MIR818d:mirbase
          Length = 139

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 60  cttatattatgggacggagggagt 83
           ||||||||||||||||||||||||
Sbjct: 103 cttatattatgggacggagggagt 126



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 1   actccctccgttccataatataag 24
           ||||||||||| ||||||||||||
Sbjct: 126 actccctccgtcccataatataag 103




>41895_hvu-MIR1120:mirbase
          Length = 84

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                         
Query: 5  cctccgttccataatataagaacgtttttca 35
          ||||||| |||||||||||||| ||||||||
Sbjct: 80 cctccgtcccataatataagaatgtttttca 50



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 59 tcttatattatgggacggagg 79
          |||||||||||||||||||||
Sbjct: 60 tcttatattatgggacggagg 80




>42165_osa-MIR818b:mirbase
          Length = 113

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 58 ctcttatattatgggacggagg 79
          ||||||||||||||||||||||
Sbjct: 22 ctcttatattatgggacggagg 1



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  cttatattatgggacggagg 79
           ||||||||||||||||||||
Sbjct: 94  cttatattatgggacggagg 113




>42219_osa-MIR1436:mirbase
          Length = 161

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 63 atattatgggacggagggagt 83
          |||||||||||||||||||||
Sbjct: 33 atattatgggacggagggagt 13



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 65  attatgggacggagggagt 83
           |||||||||||||||||||
Sbjct: 123 attatgggacggagggagt 141