miRNEST 2.0, an integrative microRNA resource :: BLAST
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 95.6 bits (48), Expect = 4e-21
Identities = 70/76 (92%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattttcagagcccatcggtatttccaatggcctccgtggat 60
||||||||||||||||||||||| ||||||||| |||| ||| | ||||||||||||||
Sbjct: 12 gcctggctccctgtatgccatttgcagagcccaccggttcttcga-tggcctccgtggat 70
Query: 61 ggcgtatgaggagcca 76
||||||||||||||||
Sbjct: 71 ggcgtatgaggagcca 86
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 87.7 bits (44), Expect = 1e-18
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattttcagagcccatcggtatttccaatggcctccgtggat 60
||||||||||||||||||||||| ||||||||| ||| || | |||||||||||||||
Sbjct: 12 gcctggctccctgtatgccatttgcagagcccaacgg-atcctcgatggcctccgtggat 70
Query: 61 ggcgtatgaggagcca 76
||||||||||||||||
Sbjct: 71 ggcgtatgaggagcca 86
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 79.8 bits (40), Expect = 3e-16
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattttcagagcccatcggtatttccaatggcctccgtggat 60
||||||||||||||||||||||| ||||||||| ||| | | | ||||||| |||||||
Sbjct: 12 gcctggctccctgtatgccatttgcagagcccaccggcacat-cgatggccttcgtggat 70
Query: 61 ggcgtatgaggagcca 76
||||||||||||||||
Sbjct: 71 ggcgtatgaggagcca 86
>41219_csi-MIR160:mirbase
Length = 143
Score = 71.9 bits (36), Expect = 6e-14
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattttcagagcccatcggtatttccaatggcctccgtggat 60
||||||||||||||||||||||| ||||| | |||| | || | ||||||||||||||
Sbjct: 34 gcctggctccctgtatgccatttgcagagtcaatcgaaacatcga-tggcctccgtggat 92
Query: 61 ggcgtatgaggagcca 76
||||||||||||||||
Sbjct: 93 ggcgtatgaggagcca 108
>40019_ath-MIR160a:mirbase
Length = 85
Score = 69.9 bits (35), Expect = 2e-13
Identities = 68/77 (88%), Gaps = 4/77 (5%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattttcagagcccatcg-gtatttccaatggcctccgtgga 59
||||||||||||||||||||| | | |||||||||| |||| | ||| ||||||||||
Sbjct: 5 gcctggctccctgtatgccatatgctgagcccatcgagtat---cgatgacctccgtgga 61
Query: 60 tggcgtatgaggagcca 76
|||||||||||||||||
Sbjct: 62 tggcgtatgaggagcca 78
>39807_aly-MIR160a:mirbase
Length = 158
Score = 61.9 bits (31), Expect = 6e-11
Identities = 67/77 (87%), Gaps = 4/77 (5%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattttcagagcccatcg-gtatttccaatggcctccgtgga 59
||||||||||||||||||||| | | |||| ||||| |||| | ||| ||||||||||
Sbjct: 43 gcctggctccctgtatgccatatgctgagctcatcgagtat---cgatgacctccgtgga 99
Query: 60 tggcgtatgaggagcca 76
|||||||||||||||||
Sbjct: 100 tggcgtatgaggagcca 116
>40436_gma-MIR160:mirbase
Length = 119
Score = 56.0 bits (28), Expect = 4e-09
Identities = 69/81 (85%), Gaps = 5/81 (6%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattttcagagcccatcg--gtatttccaatggcctccgtgg 58
||||||||||||||||||||||| ||||| ||||| | || ||||| ||| ||||
Sbjct: 22 gcctggctccctgtatgccatttgtagagctcatcgaagcat---caatgacctttgtgg 78
Query: 59 atggcgtatgaggagccaagc 79
|||||||||||||||||||||
Sbjct: 79 atggcgtatgaggagccaagc 99
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 54.0 bits (27), Expect = 1e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattttcagagcccatc 35
||||||||||||||||||||||| || ||||||||
Sbjct: 22 gcctggctccctgtatgccatttgcaaagcccatc 56
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 gtggatggcgtatgaggagccaagc 79
|||||||||||||||||||||||||
Sbjct: 60 gtggatggcgtatgaggagccaagc 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgccat 27
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 gtggatggcgtatgaggagccaagc 79
|||||||||||||||||||||||||
Sbjct: 60 gtggatggcgtatgaggagccaagc 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgccat 27
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattt 23
|||||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccattt 34
>41529_sly-MIR160a:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattt 23
|||||||||||||||||||||||
Sbjct: 21 gcctggctccctgtatgccattt 43
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 atggcgtatgaggagccaagc 79
|||||||||||||||||||||
Sbjct: 81 atggcgtatgaggagccaagc 101
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattt 23
|||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccattt 24
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattt 23
|||||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgccattt 29
>40658_mtr-MIR160:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattt 23
|||||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgccattt 44
>40339_rco-MIR160a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattt 23
|||||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgccattt 29
>40312_bra-MIR160a:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 cctccgtggatggcgtatgaggagcca 76
|||||||| ||||||||||||||||||
Sbjct: 74 cctccgtgaatggcgtatgaggagcca 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 27 gcctggctccctgtatgccat 47
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccat 32
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 21 gcctggctccctgtatgccat 41
>42707_zma-MIR160g:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 3 gcctggctccctgtatgcca 22
>42705_zma-MIR160e:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 10 gcctggctccctgtatgcca 29
>42704_zma-MIR160d:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgcca 41
>42703_zma-MIR160c:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 8 gcctggctccctgtatgcca 27
>42702_zma-MIR160b:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgcca 41
>42701_zma-MIR160a:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 11 gcctggctccctgtatgcca 30
>42677_ttu-MIR160:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 10 gcctggctccctgtatgcca 29
>42636_tae-MIR160:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 23 gcctggctccctgtatgcca 42
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>41926_osa-MIR160d:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 9 gcctggctccctgtatgcca 28
>41925_osa-MIR160c:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 8 gcctggctccctgtatgcca 27
>41924_osa-MIR160b:mirbase
Length = 139
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>41923_osa-MIR160a:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgcca 24
>41869_far-MIR160:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 54 gcctggctccctgtatgcca 73
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 32 gcctggctccctgtatgcca 51
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 32 gcctggctccctgtatgcca 51
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 32 gcctggctccctgtatgcca 51
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 33 gcctggctccctgtatgcca 52
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>40340_rco-MIR160b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgcca 26
>40021_ath-MIR160c:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgcca 25
>40020_ath-MIR160b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgcca 25
>39809_aly-MIR160c:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 25 gcctggctccctgtatgcca 44
>39808_aly-MIR160b:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgcca 41
>39732_smo-MIR160b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 14 gcctggctccctgtatgcca 33
>39463_ppt-MIR160i:mirbase
Length = 139
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>39456_ppt-MIR160b:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>39374_pab-MIR160a:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 15 gcctggctccctgtatgcca 34
