miRNEST 2.0, an integrative microRNA resource :: BLAST
>40360_rco-MIR171b:mirbase
Length = 91
Score = 69.9 bits (35), Expect = 2e-13
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatcggagaactttgctctttgtttagagagctatgttgtttga 60
|||||||||||||||||||| |||| | ||||||| | | ||||| | ||||||||||
Sbjct: 7 gatattggtgcggttcaatcagagatcattgctctatatatagagcttt-tgttgtttga 65
Query: 61 ttgagccgtgccaatatca 79
|||||||||||||||||||
Sbjct: 66 ttgagccgtgccaatatca 84
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 51 tgttgtttgattgagccgtgccaatatca 79
|||||||||||||||||||||||||||||
Sbjct: 60 tgttgtttgattgagccgtgccaatatca 88
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 44 agagctatgttgtttgattgagccgtgccaatatca 79
|||||| | |||||||||||||||||||||||||||
Sbjct: 57 agagctctattgtttgattgagccgtgccaatatca 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 14 gatattggtgcggttcaatc 33
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatca 79
|||||||||||||||||||||||||||
Sbjct: 67 ttgtttgattgagccgtgccaatatca 93
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 52 gttgtttgattgagccgtgccaatatc 78
|||||||||||||||||||||||||||
Sbjct: 27 gttgtttgattgagccgtgccaatatc 1
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 52 gttgtttgattgagccgtgccaatatc 78
|||||||||||||||||||||||||||
Sbjct: 74 gttgtttgattgagccgtgccaatatc 100
>40318_bra-MIR171a:mirbase
Length = 85
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatca 79
|||||||||||||||||||||||||||
Sbjct: 57 ttgtttgattgagccgtgccaatatca 83
>40305_bol-MIR171a:mirbase
Length = 96
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatca 79
|||||||||||||||||||||||||||
Sbjct: 63 ttgtttgattgagccgtgccaatatca 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 10 gatattggtgcggttcaatc 29
>40289_bna-MIR171e:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatca 79
|||||||||||||||||||||||||||
Sbjct: 62 ttgtttgattgagccgtgccaatatca 88
>40288_bna-MIR171d:mirbase
Length = 96
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatca 79
|||||||||||||||||||||||||||
Sbjct: 63 ttgtttgattgagccgtgccaatatca 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 10 gatattggtgcggttcaatc 29
>39851_aly-MIR171c:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatca 79
|||||||||||||||||||||||||||
Sbjct: 69 ttgtttgattgagccgtgccaatatca 95
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 tgtttgattgagccgtgccaatatca 79
||||||||||||||||||||||||||
Sbjct: 118 tgtttgattgagccgtgccaatatca 143
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatcggaga 25
|||||||||||||||||||||||||
Sbjct: 21 gatattggtgcggttcaatcggaga 45
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 51 tgttgtttgattgagccgtgccaatatca 79
|||| ||||||||||||||||||||||||
Sbjct: 70 tgttatttgattgagccgtgccaatatca 98
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 51 tgttgtttgattgagccgtgccaatatca 79
|||| ||||||||||||||||||||||||
Sbjct: 60 tgttatttgattgagccgtgccaatatca 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 6 gatattggtgcggttcaatc 25
>40457_gma-MIR171c:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 51 tgttgtttgattgagccgtgccaatatca 79
|||| ||||||||||||||||||||||||
Sbjct: 65 tgttatttgattgagccgtgccaatatca 93
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 13 gatattggtgcggttcaatc 32
>40061_ath-MIR171b:mirbase
Length = 117
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 51 tgttgtttgattgagccgtgccaatatca 79
||||||| |||||||||||||||||||||
Sbjct: 68 tgttgttcgattgagccgtgccaatatca 96
>39850_aly-MIR171b:mirbase
Length = 137
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 51 tgttgtttgattgagccgtgccaatatca 79
||||||| |||||||||||||||||||||
Sbjct: 79 tgttgttcgattgagccgtgccaatatca 107
>42762_zma-MIR171b:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatca 79
||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatca 79
||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83
>41983_osa-MIR171c:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatca 79
||||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatca 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 11 gatattggtgcggttcaatc 30
>41982_osa-MIR171b:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatca 79
||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatca 91
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatca 79
||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatca 79
||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatca 91
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaat 19
|||||||||||||||||||
Sbjct: 12 gatattggtgcggttcaat 30
>41538_sly-MIR171a:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 55 gtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||
Sbjct: 84 gtttgattgagccgtgccaatatc 107
>41216_crt-MIR171:mirbase
Length = 201
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatca 79
||||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatatca 182
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaat 19
|||||||||||||||||||
Sbjct: 104 gatattggtgcggttcaat 122
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatca 79
||||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatca 98
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 55 gtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 55 gtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>40359_rco-MIR171a:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatca 79
||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85
>40062_ath-MIR171c:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatca 79
||||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatca 108
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 29 gatattggtgcggttcaatc 48
>42769_zma-MIR171i:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 ttgattgagccgtgccaatatca 79
|||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatca 86
>42766_zma-MIR171f:mirbase
Length = 155
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 ttgattgagccgtgccaatatca 79
|||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatca 136
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatatc 120
>41182_aqc-MIR171f:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 45 gagctatgttgtttgattgagccgtgccaatatca 79
||||| |||| ||| ||||||||||||||||||||
Sbjct: 49 gagctttgttatttaattgagccgtgccaatatca 83
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatatc 104
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatatc 141
>40364_rco-MIR171f:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 84 tttgattgagccgtgccaatatc 106
>40362_rco-MIR171d:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 97 tttgattgagccgtgccaatatc 119
>40321_bra-MIR171d:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatca 79
||||| |||||||||||||||||||||
Sbjct: 65 ttgttcgattgagccgtgccaatatca 91
>40320_bra-MIR171c:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatca 79
||||| |||||||||||||||||||||
Sbjct: 59 ttgttcgattgagccgtgccaatatca 85
>40319_bra-MIR171b:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatca 79
||||| |||||||||||||||||||||
Sbjct: 66 ttgttcgattgagccgtgccaatatca 92
>40287_bna-MIR171c:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatca 79
||||| |||||||||||||||||||||
Sbjct: 59 ttgttcgattgagccgtgccaatatca 85
>40286_bna-MIR171b:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatca 79
||||| |||||||||||||||||||||
Sbjct: 65 ttgttcgattgagccgtgccaatatca 91
>40285_bna-MIR171a:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatca 79
||||| |||||||||||||||||||||
Sbjct: 66 ttgttcgattgagccgtgccaatatca 92
>42770_zma-MIR171j:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatca 79
||||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatca 111
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatca 79
||||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatca 114
>41986_osa-MIR171f:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatca 79
||||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatca 118
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatca 79
||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatca 90
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatca 79
||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatca 89
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatca 79
||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatca 92
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatca 79
||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatca 92
>41179_aqc-MIR171c:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 45 gagctatgttgtttgattgagccgtgccaatatc 78
||||| |||| ||| |||||||||||||||||||
Sbjct: 34 gagctttgttatttaattgagccgtgccaatatc 1
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatca 79
||||||||||||||||||||||
Sbjct: 55 tgattgagccgtgccaatatca 76
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatca 79
||||||||||||||||||||||
Sbjct: 75 tgattgagccgtgccaatatca 96
>40697_mtr-MIR171c:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatat 77
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
