miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41279_ctr-MIR166:mirbase
Length = 414
Score = 325 bits (164), Expect = 6e-90
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgaggccactaactagatctttgatttaatctcagttgatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 ggggaatgttgtctggctcgaggccactaactagatctttgatttaatctcagttgatca 107
Query: 61 tatatttgtttcatttttcttccataaaatttaattatattgagatacccatcattgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tatatttgtttcatttttcttccataaaatttaattatattgagatacccatcattgatc 167
Query: 121 ttaagataattaagttagtgacgtcggaccaggcttcattcccc 164
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 ttaagataattaagttagtgacgtcggaccaggcttcattcccc 211
>41222_csi-MIR166a:mirbase
Length = 202
Score = 325 bits (164), Expect = 6e-90
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgaggccactaactagatctttgatttaatctcagttgatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 ggggaatgttgtctggctcgaggccactaactagatctttgatttaatctcagttgatca 77
Query: 61 tatatttgtttcatttttcttccataaaatttaattatattgagatacccatcattgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 tatatttgtttcatttttcttccataaaatttaattatattgagatacccatcattgatc 137
Query: 121 ttaagataattaagttagtgacgtcggaccaggcttcattcccc 164
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 ttaagataattaagttagtgacgtcggaccaggcttcattcccc 181
>40348_rco-MIR166b:mirbase
Length = 119
Score = 65.9 bits (33), Expect = 9e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgaggccactaactagatctttgattt 45
||||||||||||||||||||||| |||||| ||||||| ||||||
Sbjct: 4 ggggaatgttgtctggctcgaggtcactaattagatctatgattt 48
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 134 gttagtgacgtcggaccaggcttcattcccc 164
|||||||||||||||||||||||||||||||
Sbjct: 84 gttagtgacgtcggaccaggcttcattcccc 114
>41587_vvi-MIR166e:mirbase
Length = 166
Score = 61.9 bits (31), Expect = 1e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgaggccactaactagatctttgat 43
||||||||||||||||||||||| ||| |||||||||| ||||
Sbjct: 10 ggggaatgttgtctggctcgaggacaccaactagatctatgat 52
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 142 cgtcggaccaggcttcattcccc 164
|||||||||||||||||||||||
Sbjct: 133 cgtcggaccaggcttcattcccc 155
>41322_ptc-MIR166a:mirbase
Length = 164
Score = 60.0 bits (30), Expect = 5e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgaggccactaactagatctttgatttaatctcagttgat 58
||||||||||||||||||||||| |||||| ||||| |||||| |||||| |||||
Sbjct: 11 ggggaatgttgtctggctcgaggtcactaatgggatctatgattttatctcaattgat 68
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 143 gtcggaccaggcttcattcccc 164
||||||||||||||||||||||
Sbjct: 134 gtcggaccaggcttcattcccc 155
>40036_ath-MIR166e:mirbase
Length = 143
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 134 gttagtgacgtcggaccaggcttcattcccc 164
|||| ||||||||||||||||||||||||||
Sbjct: 109 gttaatgacgtcggaccaggcttcattcccc 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgaggcc 25
||||||||||||||||| |||||||
Sbjct: 5 ggggaatgttgtctggcacgaggcc 29
>39825_aly-MIR166e:mirbase
Length = 200
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 134 gttagtgacgtcggaccaggcttcattcccc 164
|||| ||||||||||||||||||||||||||
Sbjct: 140 gttaatgacgtcggaccaggcttcattcccc 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgaggcc 25
||||||||||||||||| |||||||
Sbjct: 36 ggggaatgttgtctggcacgaggcc 60
>41171_aqc-MIR166e:mirbase
Length = 147
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 ggaatgttgtctggctcgaggccactaact 32
|||||||||||||| |||||||||||||||
Sbjct: 7 ggaatgttgtctggttcgaggccactaact 36
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 142 cgtcggaccaggcttcattcccc 164
|||||||||||||||||||||||
Sbjct: 119 cgtcggaccaggcttcattcccc 141
>40033_ath-MIR166b:mirbase
Length = 120
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 135 ttagtgacgtcggaccaggcttcattcccc 164
|||||| |||||||||||||||||||||||
Sbjct: 87 ttagtgtcgtcggaccaggcttcattcccc 116
>41532_sly-MIR166b:mirbase
Length = 201
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgaggccactaactagatc 37
||||||||||||||||||||||| ||| || ||||||
Sbjct: 37 ggggaatgttgtctggctcgaggtcaccaattagatc 73
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 134 gttagtgacgtcggaccaggcttcattcccc 164
||||||| ||||||||||||||||||||||
Sbjct: 144 gttagtgttgtcggaccaggcttcattcccc 174
>41226_csi-MIR166e:mirbase
Length = 177
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgaggccacta 29
||||||||||||||||||||||| |||||
Sbjct: 20 ggggaatgttgtctggctcgaggacacta 48
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 142 cgtcggaccaggcttcattcccc 164
|||||||||||||||||||||||
Sbjct: 137 cgtcggaccaggcttcattcccc 159
>41048_ghr-MIR166b:mirbase
Length = 154
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 136 tagtgacgtcggaccaggcttcattcccc 164
||||| |||||||||||||||||||||||
Sbjct: 122 tagtgtcgtcggaccaggcttcattcccc 150
>41585_vvi-MIR166c:mirbase
Length = 160
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgaggccact 28
||||||||||||||||||||||| ||||
Sbjct: 10 ggggaatgttgtctggctcgaggacact 37
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 142 cgtcggaccaggcttcattcccc 164
|||||||||||||||||||||||
Sbjct: 127 cgtcggaccaggcttcattcccc 149
>40351_rco-MIR166e:mirbase
Length = 131
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 137 agtgacgtcggaccaggcttcattcccc 164
|||| |||||||||||||||||||||||
Sbjct: 99 agtgtcgtcggaccaggcttcattcccc 126
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgagg 23
|||||||||||||||||||||||
Sbjct: 4 ggggaatgttgtctggctcgagg 26
>42721_zma-MIR166e:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgagg 23
|||||||||||||||||||||||
Sbjct: 1 ggggaatgttgtctggctcgagg 23
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 tcggaccaggcttcattcccc 164
|||||||||||||||||||||
Sbjct: 67 tcggaccaggcttcattcccc 87
>42719_zma-MIR166c:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgagg 23
|||||||||||||||||||||||
Sbjct: 1 ggggaatgttgtctggctcgagg 23
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 tcggaccaggcttcattcccc 164
|||||||||||||||||||||
Sbjct: 72 tcggaccaggcttcattcccc 92
>42511_sbi-MIR166d:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgagg 23
|||||||||||||||||||||||
Sbjct: 1 ggggaatgttgtctggctcgagg 23
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 tcggaccaggcttcattcccc 164
|||||||||||||||||||||
Sbjct: 67 tcggaccaggcttcattcccc 87
>41940_osa-MIR166d:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgagg 23
|||||||||||||||||||||||
Sbjct: 19 ggggaatgttgtctggctcgagg 41
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 tcggaccaggcttcattcccc 164
|||||||||||||||||||||
Sbjct: 91 tcggaccaggcttcattcccc 111
>41747_bdi-MIR166e:mirbase
Length = 151
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgagg 23
|||||||||||||||||||||||
Sbjct: 33 ggggaatgttgtctggctcgagg 55
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 tcggaccaggcttcattcccc 164
|||||||||||||||||||||
Sbjct: 99 tcggaccaggcttcattcccc 119
>41586_vvi-MIR166d:mirbase
Length = 160
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgaggccac 27
||||| |||||||||||||||||||||
Sbjct: 10 ggggattgttgtctggctcgaggccac 36
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 134 gttagtgacgtcggaccaggcttcattcccc 164
||||||| | |||||||||||||||||||||
Sbjct: 119 gttagtgccctcggaccaggcttcattcccc 149
>41332_ptc-MIR166k:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgagg 23
|||||||||||||||||||||||
Sbjct: 11 ggggaatgttgtctggctcgagg 33
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 143 gtcggaccaggcttcattcccc 164
||||||||||||||||||||||
Sbjct: 113 gtcggaccaggcttcattcccc 134
>41331_ptc-MIR166j:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgagg 23
|||||||||||||||||||||||
Sbjct: 11 ggggaatgttgtctggctcgagg 33
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 143 gtcggaccaggcttcattcccc 164
||||||||||||||||||||||
Sbjct: 113 gtcggaccaggcttcattcccc 134
>41324_ptc-MIR166c:mirbase
Length = 134
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgagg 23
|||||||||||||||||||||||
Sbjct: 11 ggggaatgttgtctggctcgagg 33
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 142 cgtcggaccaggcttcattcccc 164
|||||||||||||||||||||||
Sbjct: 103 cgtcggaccaggcttcattcccc 125
>40674_mtr-MIR166g:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgagg 23
|||||||||||||||||||||||
Sbjct: 6 ggggaatgttgtctggctcgagg 28
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 tcggaccaggcttcattcccc 164
|||||||||||||||||||||
Sbjct: 82 tcggaccaggcttcattcccc 102
>40439_gma-MIR166a:mirbase
Length = 146
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgagg 23
|||||||||||||||||||||||
Sbjct: 21 ggggaatgttgtctggctcgagg 43
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 143 gtcggaccaggcttcattcccc 164
||||||||||||||||||||||
Sbjct: 106 gtcggaccaggcttcattcccc 127
>40264_bna-MIR166a:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 142 cgtcggaccaggcttcattcccc 164
|||||||||||||||||||||||
Sbjct: 109 cgtcggaccaggcttcattcccc 131
>39821_aly-MIR166a:mirbase
Length = 167
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcgagg 23
|||||||||||||||||||||||
Sbjct: 18 ggggaatgttgtctggctcgagg 40
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 142 cgtcggaccaggcttcattcccc 164
|||||||||||||||||||||||
Sbjct: 131 cgtcggaccaggcttcattcccc 153
>39420_pta-MIR166a:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 142 cgtcggaccaggcttcattcccc 164
|||||||||||||||||||||||
Sbjct: 64 cgtcggaccaggcttcattcccc 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttgtctggctcga 21
|||||||||||||||||||||
Sbjct: 9 ggggaatgttgtctggctcga 29
>41949_osa-MIR166m:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 gtgacgtcggaccaggcttcattccc 163
||||| ||||||||||||||||||||
Sbjct: 141 gtgacctcggaccaggcttcattccc 166
>40266_bna-MIR166c:mirbase
Length = 128
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 143 gtcggaccaggcttcattcccc 164
||||||||||||||||||||||
Sbjct: 92 gtcggaccaggcttcattcccc 113
>40265_bna-MIR166b:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 143 gtcggaccaggcttcattcccc 164
||||||||||||||||||||||
Sbjct: 90 gtcggaccaggcttcattcccc 111
>40037_ath-MIR166f:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 143 gtcggaccaggcttcattcccc 164
||||||||||||||||||||||
Sbjct: 77 gtcggaccaggcttcattcccc 98
>39826_aly-MIR166f:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 143 gtcggaccaggcttcattcccc 164
||||||||||||||||||||||
Sbjct: 77 gtcggaccaggcttcattcccc 98
>39735_smo-MIR166c:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 143 gtcggaccaggcttcattcccc 164
||||||||||||||||||||||
Sbjct: 106 gtcggaccaggcttcattcccc 127
>39421_pta-MIR166b:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 143 gtcggaccaggcttcattcccc 164
||||||||||||||||||||||
Sbjct: 89 gtcggaccaggcttcattcccc 110
