miRNEST 2.0, an integrative microRNA resource :: BLAST
>40464_gma-MIR319a:mirbase
Length = 207
Score = 208 bits (105), Expect = 1e-54
Identities = 155/169 (91%), Gaps = 2/169 (1%)
Strand = Plus / Plus
Query: 4 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 63
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 23 gagctttcttcagtccactcatgggtgacagtaagattcaattagctgccgactcattca 82
Query: 64 tccaaatgctgagtagtgatactcttaaagatactcatcaaatgagtgaatgatgcggga 123
|||||||| ||||| || | | |||| ||||||| || |||||||||||||||||||
Sbjct: 83 tccaaatgttgagt-gtaag-cgaataaatatactcagcagatgagtgaatgatgcggga 140
Query: 124 gacaaattgattcttaagtttcctgtacttggactgaagggagctccct 172
|||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gacaaattgaatcttaagtttcctgtacttggactgaagggagctccct 189
>40465_gma-MIR319b:mirbase
Length = 208
Score = 200 bits (101), Expect = 2e-52
Identities = 156/171 (91%), Gaps = 5/171 (2%)
Strand = Plus / Plus
Query: 4 gagctttcttcagtccactcataggtggcagtaagatt-caattagctgccgactcattc 62
||||||||||||||||||| || |||| || ||||||| |||||||||||||||||||||
Sbjct: 23 gagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgactcattc 82
Query: 63 atccaaatgctgagtagtgata-ctcttaaagatactcatcaaatgagtgaatgatgcgg 121
||||||||||||||| || | | ||||||||||| ||||||||||||||||||||
Sbjct: 83 atccaaatgctgagt---gaaagcgaagaaagatactcagcaaatgagtgaatgatgcgg 139
Query: 122 gagacaaattgattcttaagtttcctgtacttggactgaagggagctccct 172
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gagacaaattgattcttaagtttcctgtacttggactgaagggagctccct 190
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 165 bits (83), Expect = 1e-41
Identities = 151/171 (88%), Gaps = 2/171 (1%)
Strand = Plus / Plus
Query: 4 gagctttcttcagtccactcataggtggcagtaagatt-caattagctgccgactcattc 62
|||||||||| ||||||||||| |||| || ||||||| ||||||||||| |||||||||
Sbjct: 6 gagctttctttagtccactcatgggtgacaataagatttcaattagctgctgactcattc 65
Query: 63 atccaaatgctgagtagtg-atactcttaaagatactcatcaaatgagtgaatgatgcgg 121
||||||||| |||||| ||| | | ||||||||||||||||||||||||||||
Sbjct: 66 atccaaatgttgagtaaaatatatagaaacatatactcatcaaatgagtgaatgatgcgg 125
Query: 122 gagacaaattgattcttaagtttcctgtacttggactgaagggagctccct 172
|||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 126 gagacaaattgaatcttaagtttcctatacttggactgaagggagctccct 176
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 141 bits (71), Expect = 2e-34
Identities = 147/170 (86%), Gaps = 3/170 (1%)
Strand = Plus / Plus
Query: 4 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 63
|||||||||||||||||||||| ||||| |||| |||| |||||||||||||||||||||
Sbjct: 13 gagctttcttcagtccactcatgggtggtagtaggatttaattagctgccgactcattca 72
Query: 64 tccaaatgctgagtagtgatactcttaaagat-actcatcaaatgagtgaatgatgcggg 122
||||||| |||||| | | | |||| || || ||||||||||||||||||||
Sbjct: 73 tccaaatactgagt--taaaggacaaggagattacccagtaaatgagtgaatgatgcggg 130
Query: 123 agacaaattgattcttaagtttcctgtacttggactgaagggagctccct 172
||||||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct: 131 agacaaattgaatcctaagcttcctgtacttggactgaagggagctccct 180
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 127 bits (64), Expect = 3e-30
Identities = 143/170 (84%), Gaps = 12/170 (7%)
Strand = Plus / Plus
Query: 4 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 63
|||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||
Sbjct: 13 gagctttcttcagtccactcatgggtggcagtaggattgaattagctgccgactcattca 72
Query: 64 tccaaatgctgagtagtgatactcttaaaga-tactcatcaaatgagtgaatgatgcggg 122
||||||| ||| | |||| || ||| || |||||| |||||||||||||
Sbjct: 73 tccaaatactg-----------tgttaaggactacccagtaaatgattgaatgatgcggg 121
Query: 123 agacaaattgattcttaagtttcctgtacttggactgaagggagctccct 172
|||||||||| ||||||| | ||||| ||||||||||||||||||||||
Sbjct: 122 agacaaattggatcttaagctccctgtgcttggactgaagggagctccct 171
>41282_ctr-MIR319:mirbase
Length = 186
Score = 123 bits (62), Expect = 5e-29
Identities = 144/169 (85%), Gaps = 3/169 (1%)
Strand = Plus / Plus
Query: 4 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 63
||||||||||| ||||||| || ||||||| || |||| |||||||||| ||||||||||
Sbjct: 10 gagctttcttcggtccacttatgggtggcaataggatttaattagctgctgactcattca 69
Query: 64 tccaaatgctgagtagtgatactcttaaag-atactcatcaaatgagtgaatgatgcggg 122
||||||| || |||| | || || | |||| || ||||||||||||||||||||
Sbjct: 70 tccaaatacttagtaaaggg--tcgaaatggatacccagtaaatgagtgaatgatgcggg 127
Query: 123 agacaaattgattcttaagtttcctgtacttggactgaagggagctccc 171
||||||||||| ||||||| ||||||| |||||||||||||||||||||
Sbjct: 128 agacaaattgaatcttaagcttcctgtgcttggactgaagggagctccc 176
>40367_rco-MIR319a:mirbase
Length = 211
Score = 123 bits (62), Expect = 5e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 103 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 162
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 137 aaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtacttggactgaag 196
Query: 163 ggagctccct 172
||||||||||
Sbjct: 197 ggagctccct 206
Score = 107 bits (54), Expect = 3e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 4 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 63
|||||||||||||||||||||| |||||| ||| |||| |||||||||||||||||||||
Sbjct: 7 gagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactcattca 66
Query: 64 tccaaatgctgagt 77
||||||| ||||||
Sbjct: 67 tccaaatactgagt 80
>41185_aqc-MIR319:mirbase
Length = 177
Score = 87.7 bits (44), Expect = 3e-18
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 4 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 63
||||| |||||||||||||||||||| | ||| |||||||||| ||||||||||||||||
Sbjct: 4 gagctctcttcagtccactcataggtagtagtcagattcaatttgctgccgactcattca 63
Query: 64 tcca 67
||||
Sbjct: 64 tcca 67
Score = 67.9 bits (34), Expect = 2e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 103 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 162
|||||| |||||||| ||||||| ||||| ||||| | ||| ||||||||||||||||
Sbjct: 106 aaatgaatgaatgatccgggagattaattggatcttatgcttcttgtacttggactgaag 165
Query: 163 ggagctccct 172
||||||||||
Sbjct: 166 ggagctccct 175
>41544_sly-MIR319:mirbase
Length = 168
Score = 77.8 bits (39), Expect = 2e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 97 ctcatcaaatgagtgaatgatgcgggag-acaaattgattcttaagtttcctgtacttgg 155
|||| ||| ||||||||||| ||||||| |||| |||| |||| || |||||||||||||
Sbjct: 94 ctcagcaactgagtgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttgg 153
Query: 156 actgaagggagctcc 170
|||||||||||||||
Sbjct: 154 actgaagggagctcc 168
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 67.9 bits (34), Expect = 2e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 103 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 162
|||||| ||| |||||||||||||||||| | |||||| ||||| | |||||||||||
Sbjct: 108 aaatgaatgagtgatgcgggagacaaattaaatcttaaacttcctatcattggactgaag 167
Query: 163 ggagctccct 172
||||||||||
Sbjct: 168 ggagctccct 177
>40070_ath-MIR319b:mirbase
Length = 172
Score = 67.9 bits (34), Expect = 2e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 103 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 162
|||||| ||||||||||| |||||||||||| |||| | || || | ||||||||||||
Sbjct: 103 aaatgaatgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaag 162
Query: 163 ggagctccct 172
||||||||||
Sbjct: 163 ggagctccct 172
>39859_aly-MIR319b:mirbase
Length = 246
Score = 67.9 bits (34), Expect = 2e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 103 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 162
|||||| ||||||||||| |||||||||||| |||| | || || | ||||||||||||
Sbjct: 142 aaatgaatgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaag 201
Query: 163 ggagctccct 172
||||||||||
Sbjct: 202 ggagctccct 211
>40069_ath-MIR319a:mirbase
Length = 176
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 38 gattcaattagctgccgactcattcatccaaat 70
||||||||||||| |||||||||||||||||||
Sbjct: 40 gattcaattagcttccgactcattcatccaaat 72
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 ttggactgaagggagctccct 172
|||||||||||||||||||||
Sbjct: 154 ttggactgaagggagctccct 174
>39858_aly-MIR319a:mirbase
Length = 221
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 42 caattagctgccgactcattcatccaaat 70
||||||||| |||||||||||||||||||
Sbjct: 67 caattagcttccgactcattcatccaaat 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 103 aaatgagtgaatgatgcgggagacaaattg 132
|||||| |||||||||||| ||||||||||
Sbjct: 128 aaatgaatgaatgatgcggtagacaaattg 157
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 ttggactgaagggagctccct 172
|||||||||||||||||||||
Sbjct: 177 ttggactgaagggagctccct 197
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 146 ctgtacttggactgaagggagctccct 172
|||| ||||||||||||||||||||||
Sbjct: 156 ctgtgcttggactgaagggagctccct 182
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 44 attagctgccgactcattcatccaaa 69
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 146 ctgtacttggactgaagggagctccct 172
|||| ||||||||||||||||||||||
Sbjct: 159 ctgtgcttggactgaagggagctccct 185
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 44 attagctgccgactcattcatccaaa 69
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 146 ctgtacttggactgaagggagctccct 172
|||| ||||||||||||||||||||||
Sbjct: 162 ctgtgcttggactgaagggagctccct 188
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 gagctttcttcagtccactcat 25
||||||||||||||||||||||
Sbjct: 13 gagctttcttcagtccactcat 34
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 44 attagctgccgactcattcatccaaa 69
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
>40369_rco-MIR319c:mirbase
Length = 188
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 146 ctgtacttggactgaagggagctccct 172
|||| ||||||||||||||||||||||
Sbjct: 157 ctgtgcttggactgaagggagctccct 183
>42781_zma-MIR319b:mirbase
Length = 213
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 43 aattagctgccgactcattcatccaaatgc 72
||||||||||||||||||||| ||| ||||
Sbjct: 63 aattagctgccgactcattcacccacatgc 92
>42642_tae-MIR319:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 cttggactgaagggagctccct 172
||||||||||||||||||||||
Sbjct: 183 cttggactgaagggagctccct 204
>42563_sbi-MIR319:mirbase
Length = 249
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 43 aattagctgccgactcattcatccaaatgc 72
||||||||||||||||||||| ||| ||||
Sbjct: 75 aattagctgccgactcattcacccacatgc 104
>41995_osa-MIR319b:mirbase
Length = 197
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 43 aattagctgccgactcattcatccaaatgc 72
||||||||||||||||||||| ||| ||||
Sbjct: 53 aattagctgccgactcattcacccacatgc 82
>41770_bdi-MIR319:mirbase
Length = 280
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 cttggactgaagggagctccct 172
||||||||||||||||||||||
Sbjct: 225 cttggactgaagggagctccct 246
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 cttggactgaagggagctccct 172
||||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctccct 183
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 43 aattagctgccgactcattcat 64
||||||||||||||||||||||
Sbjct: 55 aattagctgccgactcattcat 76
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 146 ctgtacttggactgaagggagctcc 170
|||| ||||||||||||||||||||
Sbjct: 168 ctgtgcttggactgaagggagctcc 192
>40703_mtr-MIR319:mirbase
Length = 207
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 cttggactgaagggagctccct 172
||||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctccct 189
>40368_rco-MIR319b:mirbase
Length = 179
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 cttggactgaagggagctccct 172
||||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctccct 174
>39740_smo-MIR319:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 151 cttggactgaagggagctccct 172
||||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccct 206
>42783_zma-MIR319d:mirbase
Length = 212
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 44 attagctgccgactcattcatccaaatgc 72
|||||||||||||||||||| ||| ||||
Sbjct: 63 attagctgccgactcattcacccacatgc 91
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 146 ctgtacttggactgaagggagctcc 170
|||| ||||||||||||||||||||
Sbjct: 170 ctgtgcttggactgaagggagctcc 194
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 cttggactgaagggagctccc 171
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 cttggactgaagggagctccc 171
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 cttggactgaagggagctccc 171
|||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174
>41639_vvi-MIR319g:mirbase
Length = 222
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 152 ttggactgaagggagctccc 171
||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 cttggactgaagggagctcc 170
||||||||||||||||||||
Sbjct: 409 cttggactgaagggagctcc 428
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 cttggactgaagggagctcc 170
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 cttggactgaagggagctcc 170
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
