miRNEST 2.0, an integrative microRNA resource :: BLAST
>40397_ahy-MIR159:mirbase
Length = 197
Score = 335 bits (169), Expect = 7e-93
Identities = 172/173 (99%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgga 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 ggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgga 63
Query: 61 tcccacagtactacccatatataccccattatgcagtggtagttctgcggattccatatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tcccacagtactacccatatataccccattatgcagtggtagttctgcggattccatatc 123
Query: 121 ctgggagcttcattacctttccacagatccttatttggattgaagggagctct 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ctgggagcttcattacctttccacagatccttatttggattgaagggagctct 176
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 99.6 bits (50), Expect = 7e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgga 60
||||||||||||||||||| |||| |||| |||||||||||||||||| |||||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 tcccacagtactacccat 78
||||||||| ||||||||
Sbjct: 63 tcccacagttctacccat 80
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 147 atccttatttggattgaagggagctct 173
|||||| ||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 99.6 bits (50), Expect = 7e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgga 60
||||||||||||||||||| |||| |||| |||||||||||||||||| |||||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 tcccacagtactacccat 78
||||||||| ||||||||
Sbjct: 63 tcccacagttctacccat 80
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 147 atccttatttggattgaagggagctct 173
|||||| ||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctct 172
>40338_rco-MIR159:mirbase
Length = 180
Score = 95.6 bits (48), Expect = 1e-20
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgga 60
||||||||||||||||||| ||||| ||||| ||||| |||||||||||| |||||||||
Sbjct: 5 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 64
Query: 61 tcccacag 68
||||||||
Sbjct: 65 tcccacag 72
Score = 52.0 bits (26), Expect = 1e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 124 ggagcttcattacctttccacagatccttatttggattgaagggagctct 173
|||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 125 ggagcttcattaccttgtattagatccttgtttggattgaagggagctct 174
>40432_gma-MIR159a:mirbase
Length = 214
Score = 91.7 bits (46), Expect = 2e-19
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgga 60
||||||||||||||||||| |||| |||| |||||| ||||||||||| |||||||||
Sbjct: 22 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 81
Query: 61 tcccacagtactacccat 78
||||||||| ||||||||
Sbjct: 82 tcccacagttctacccat 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 149 ccttatttggattgaagggagctct 173
|||| ||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctct 194
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 85.7 bits (43), Expect = 1e-17
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgga 60
||||||||||||||||||| ||||| ||||| ||||| |||| |||||||||||||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 tcc 63
|||
Sbjct: 72 tcc 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 145 agatccttatttggattgaagggagctct 173
|||||| | ||||||||||||||||||||
Sbjct: 145 agatccctttttggattgaagggagctct 173
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 85.7 bits (43), Expect = 1e-17
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgga 60
||||||||||||||||||| ||||| ||||| ||||| |||| |||||||||||||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 tcc 63
|||
Sbjct: 72 tcc 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 145 agatccttatttggattgaagggagctct 173
|||||| | ||||||||||||||||||||
Sbjct: 145 agatccctttttggattgaagggagctct 173
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 79.8 bits (40), Expect = 6e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgga 60
||||||||||||||||||| |||||||||| ||||| |||||||||||| | ||||||
Sbjct: 10 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 69
Query: 61 tcccacag 68
||||||||
Sbjct: 70 tcccacag 77
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 145 agatccttatttggattgaagggagctct 173
|||||||| ||||||||||||||||||||
Sbjct: 151 agatccttgtttggattgaagggagctct 179
>40435_gma-MIR159d:mirbase
Length = 103
Score = 65.9 bits (33), Expect = 9e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 34 gggtggattgagctgctaagctatggatcccacagtactacccat 78
||||| ||||||||||| |||||||||||||||||| ||||||||
Sbjct: 1 gggtgaattgagctgcttagctatggatcccacagttctacccat 45
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 63.9 bits (32), Expect = 4e-11
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatgga 60
||||||||||||||||||| ||| | || || ||||| ||| |||||||| ||||||| |
Sbjct: 12 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 71
Query: 61 tcccacag 68
||||||||
Sbjct: 72 tcccacag 79
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 145 agatccttatttggattgaagggagctct 173
||||| || ||||||||||||||||||||
Sbjct: 149 agatctttttttggattgaagggagctct 177
>41218_csi-MIR159:mirbase
Length = 216
Score = 60.0 bits (30), Expect = 6e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaacagagggtcttggt-gggtggattgagctgctaagctatgg 59
||||||||||||||||||| ||||| ||| | |||| ||||||||||| ||||||||
Sbjct: 13 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 72
Query: 60 atcccacagt 69
||||||||||
Sbjct: 73 atcccacagt 82
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctct 205
>40017_ath-MIR159b:mirbase
Length = 196
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agctgctaagctatggatccca 65
||||||||||||||||||||||
Sbjct: 48 agctgctaagctatggatccca 69
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 168 tttggattgaagggagctct 187
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agctgctaagctatggatccca 65
||||||||||||||||||||||
Sbjct: 47 agctgctaagctatggatccca 68
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
>39805_aly-MIR159b:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agctgctaagctatggatccca 65
||||||||||||||||||||||
Sbjct: 60 agctgctaagctatggatccca 81
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 169 tttggattgaagggagctct 188
>39804_aly-MIR159a:mirbase
Length = 222
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 agctgctaagctatggatccca 65
||||||||||||||||||||||
Sbjct: 66 agctgctaagctatggatccca 87
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctct 202
>41528_sly-MIR159:mirbase
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaca 21
|||||||||||||||||||||
Sbjct: 2 ggagctccttgaagtccaaca 22
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
