miRNEST 2.0, an integrative microRNA resource :: BLAST
>40065_ath-MIR172c:mirbase
Length = 133
Score = 260 bits (131), Expect = 2e-70
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 1 gctactgttcgctgttggagcatcatcaagattcacaaatcatcaagtattcgtgtaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gctactgttcgctgttggagcatcatcaagattcacaaatcatcaagtattcgtgtaaat 61
Query: 61 aaacccatttatgattagatttttgatgtatgtatgagaatcttgatgatgctgcagctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aaacccatttatgattagatttttgatgtatgtatgagaatcttgatgatgctgcagctg 121
Query: 121 caatcagtggc 131
|||||||||||
Sbjct: 122 caatcagtggc 132
>39854_aly-MIR172c:mirbase
Length = 133
Score = 228 bits (115), Expect = 8e-61
Identities = 127/131 (96%)
Strand = Plus / Plus
Query: 1 gctactgttcgctgttggagcatcatcaagattcacaaatcatcaagtattcgtgtaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gctactgttcgctgttggagcatcatcaagattcacaaatcatcaagtattcgtgtaaat 61
Query: 61 aaacccatttatgattagatttttgatgtatgtatgagaatcttgatgatgctgcagctg 120
||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gaacccatttataattatattgttgatgtatgtatgagaatcttgatgatgctgcagctg 121
Query: 121 caatcagtggc 131
|||||||||||
Sbjct: 122 caatcagtggc 132
>41050_ghr-MIR172:mirbase
Length = 125
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 4 actgttcgctgttggagcatcatcaagattcacaa 38
|||||| ||||||||||||||||||||||||||||
Sbjct: 5 actgtttgctgttggagcatcatcaagattcacaa 39
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 95 tgagaatcttgatgatgctgcagctgcaatcagtggc 131
|||||||| |||||||||||||| ||||| ||||||
Sbjct: 88 tgagaatcctgatgatgctgcagtggcaataagtggc 124
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 4 actgttcgctgttggagcatcatcaagattcacaaa 39
|||||| |||| ||||||||||||||||||||||||
Sbjct: 7 actgtttgctgatggagcatcatcaagattcacaaa 42
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 89 tatgtatgagaatcttgatgatgctgcagctgcaat 124
|||||||| ||||||||||||||||||||| |||||
Sbjct: 107 tatgtatgggaatcttgatgatgctgcagcggcaat 142
>40702_mtr-MIR172:mirbase
Length = 113
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 93 tatgagaatcttgatgatgctgcagctgca 122
|||||||||| |||||||||||||||||||
Sbjct: 84 tatgagaatcctgatgatgctgcagctgca 113
>40066_ath-MIR172d:mirbase
Length = 124
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 95 tgagaatcttgatgatgctgcagctgcaat 124
|||||||||||||||||||||||| |||||
Sbjct: 86 tgagaatcttgatgatgctgcagcggcaat 115
>39855_aly-MIR172d:mirbase
Length = 163
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 95 tgagaatcttgatgatgctgcagctgcaat 124
|||||||||||||||||||||||| |||||
Sbjct: 110 tgagaatcttgatgatgctgcagcggcaat 139
>42775_zma-MIR172a:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 4e-07
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 90 atgtatgagaatcttgatgatgctgca 116
||| |||||||||||||||||||||||
Sbjct: 56 atgyatgagaatcttgatgatgctgca 82
>39852_aly-MIR172a:mirbase
Length = 149
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 94 atgagaatcttgatgatgctgcagctgcaatca 126
||||||||||||||||||||||| | |||||||
Sbjct: 96 atgagaatcttgatgatgctgcatcggcaatca 128
>41235_csi-MIR172c:mirbase
Length = 163
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 4 actgttcgctgttggagcatcatcaagattcacaaa 39
|||||| || ||||||||| ||||||||||||||||
Sbjct: 1 actgtttgcagttggagcaccatcaagattcacaaa 36
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 98 gaatcttgatgatgctgcagctgcaatcagtggc 131
||||||||||||||||||||| || || ||||||
Sbjct: 121 gaatcttgatgatgctgcagcagcgataagtggc 154
>41183_aqc-MIR172a:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 tatgagaatcttgatgatgctgca 116
||||||||||||||||||||||||
Sbjct: 94 tatgagaatcttgatgatgctgca 117
>40462_gma-MIR172e:mirbase
Length = 153
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 93 tatgagaatcttgatgatgctgcagctgcaat 124
|||| ||||||||||||||||||||| |||||
Sbjct: 110 tatgggaatcttgatgatgctgcagcagcaat 141
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tggagcatcatcaagattcacaa 38
|||||||||||||||||||||||
Sbjct: 22 tggagcatcatcaagattcacaa 44
>40461_gma-MIR172d:mirbase
Length = 150
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 93 tatgagaatcttgatgatgctgcagctgcaat 124
|||| ||||||||||||||||||||| |||||
Sbjct: 107 tatgggaatcttgatgatgctgcagcagcaat 138
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tggagcatcatcaagattcacaa 38
|||||||||||||||||||||||
Sbjct: 22 tggagcatcatcaagattcacaa 44
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 98 gaatcttgatgatgctgcagctgcaatcag 127
|||||||||||||||| || ||||||||||
Sbjct: 40 gaatcttgatgatgctccatctgcaatcag 11
>40460_gma-MIR172c:mirbase
Length = 153
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 93 tatgagaatcttgatgatgctgcagctgcaat 124
|||| ||||||||||||||||||||| |||||
Sbjct: 110 tatgggaatcttgatgatgctgcagcagcaat 141
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tggagcatcatcaagattcacaa 38
|||||||||||||||||||||||
Sbjct: 22 tggagcatcatcaagattcacaa 44
>40366_rco-MIR172:mirbase
Length = 144
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 tggagcatcatcaagattcacaaa 39
||||||||||||||||||||||||
Sbjct: 5 tggagcatcatcaagattcacaaa 28
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 93 tatgagaatcttgatgatgctgcagc 118
|||| |||||||||||||||||||||
Sbjct: 115 tatgggaatcttgatgatgctgcagc 140
>40324_bra-MIR172b:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 tatgagaatcttgatgatgctgca 116
||||||||||||||||||||||||
Sbjct: 78 tatgagaatcttgatgatgctgca 101
>40323_bra-MIR172a:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 tatgagaatcttgatgatgctgca 116
||||||||||||||||||||||||
Sbjct: 83 tatgagaatcttgatgatgctgca 106
>40307_bol-MIR172b:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 tatgagaatcttgatgatgctgca 116
||||||||||||||||||||||||
Sbjct: 78 tatgagaatcttgatgatgctgca 101
>40306_bol-MIR172a:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 tatgagaatcttgatgatgctgca 116
||||||||||||||||||||||||
Sbjct: 83 tatgagaatcttgatgatgctgca 106
>40064_ath-MIR172b:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 tatgagaatcttgatgatgctgca 116
||||||||||||||||||||||||
Sbjct: 67 tatgagaatcttgatgatgctgca 90
>39853_aly-MIR172b:mirbase
Length = 146
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 tatgagaatcttgatgatgctgca 116
||||||||||||||||||||||||
Sbjct: 89 tatgagaatcttgatgatgctgca 112
>42778_zma-MIR172d:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 atgagaatcttgatgatgctgca 116
|||||||||||||||||||||||
Sbjct: 51 atgagaatcttgatgatgctgca 73
>42777_zma-MIR172c:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 atgagaatcttgatgatgctgca 116
|||||||||||||||||||||||
Sbjct: 100 atgagaatcttgatgatgctgca 122
>42776_zma-MIR172b:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 atgagaatcttgatgatgctgca 116
|||||||||||||||||||||||
Sbjct: 103 atgagaatcttgatgatgctgca 125
>42560_sbi-MIR172d:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 atgagaatcttgatgatgctgca 116
|||||||||||||||||||||||
Sbjct: 65 atgagaatcttgatgatgctgca 87
>42559_sbi-MIR172c:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 atgagaatcttgatgatgctgca 116
|||||||||||||||||||||||
Sbjct: 96 atgagaatcttgatgatgctgca 118
>42557_sbi-MIR172a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 atgagaatcttgatgatgctgca 116
|||||||||||||||||||||||
Sbjct: 79 atgagaatcttgatgatgctgca 101
>41993_osa-MIR172d:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 atgagaatcttgatgatgctgca 116
|||||||||||||||||||||||
Sbjct: 88 atgagaatcttgatgatgctgca 110
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 atgagaatcttgatgatgctgca 116
|||||||||||||||||||||||
Sbjct: 96 atgagaatcttgatgatgctgca 118
>41725_ata-MIR172:mirbase
Length = 277
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 atgagaatcttgatgatgctgca 116
|||||||||||||||||||||||
Sbjct: 206 atgagaatcttgatgatgctgca 228
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 atgagaatcttgatgatgctgca 116
|||||||||||||||||||||||
Sbjct: 76 atgagaatcttgatgatgctgca 98
>41633_vvi-MIR172c:mirbase
Length = 138
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tggagcatcatcaagattcacaa 38
|||||||||||||||||||||||
Sbjct: 10 tggagcatcatcaagattcacaa 32
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 98 gaatcttgatgatgctgcagctgcaat 124
||||||||||||||||||||| |||||
Sbjct: 109 gaatcttgatgatgctgcagcggcaat 135
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 94 atgagaatcttgatgatgctgca 116
|||||||||||||||||||||||
Sbjct: 32 atgagaatcttgatgatgctgca 10
>41402_ptc-MIR172h:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 98 gaatcttgatgatgctgcagctgcaat 124
||||||||||||||||||||| |||||
Sbjct: 115 gaatcttgatgatgctgcagcggcaat 141
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tggagcatcatcaagattcacaaa 39
||||||| ||||||||||||||||
Sbjct: 12 tggagcaccatcaagattcacaaa 35
>41401_ptc-MIR172g:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tggagcatcatcaagattcacaa 38
|||||||||||||||||||||||
Sbjct: 12 tggagcatcatcaagattcacaa 34
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 98 gaatcttgatgatgctgcagctgcaat 124
||||||||||||||||||||| |||||
Sbjct: 115 gaatcttgatgatgctgcagcggcaat 141
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 atgagaatcttgatgatgctgca 116
|||||||||||||||||||||||
Sbjct: 117 atgagaatcttgatgatgctgca 139
>40063_ath-MIR172a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 atgagaatcttgatgatgctgca 116
|||||||||||||||||||||||
Sbjct: 75 atgagaatcttgatgatgctgca 97
>42779_zma-MIR172e:mirbase
Length = 174
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 87 tgtatgtatgagaatcttgatgatgctgca 116
||||||| || |||||||||||||||||||
Sbjct: 125 tgtatgtgtgggaatcttgatgatgctgca 154
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 87 tgtatgtatgagaatcttgatgatgctgca 116
||||||| || |||||||||||||||||||
Sbjct: 140 tgtatgtgtgggaatcttgatgatgctgca 169
>41990_osa-MIR172a:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 tgagaatcttgatgatgctgca 116
||||||||||||||||||||||
Sbjct: 77 tgagaatcttgatgatgctgca 98
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 95 tgagaatcttgatgatgctgca 116
||||||||||||||||||||||
Sbjct: 31 tgagaatcttgatgatgctgca 10
>41543_sly-MIR172b:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 tgagaatcttgatgatgctgca 116
||||||||||||||||||||||
Sbjct: 113 tgagaatcttgatgatgctgca 134
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 tgagaatcttgatgatgctgca 116
||||||||||||||||||||||
Sbjct: 130 tgagaatcttgatgatgctgca 151
>41397_ptc-MIR172c:mirbase
Length = 128
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 98 gaatcttgatgatgctgcagctgcaa 123
||||||||||||||||||| ||||||
Sbjct: 30 gaatcttgatgatgctgcacctgcaa 5
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 tgagaatcttgatgatgctgca 116
||||||||||||||||||||||
Sbjct: 97 tgagaatcttgatgatgctgca 118
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tggagcatcatcaagattcaca 37
||||||||||||||||||||||
Sbjct: 12 tggagcatcatcaagattcaca 33
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 tgagaatcttgatgatgctgca 116
||||||||||||||||||||||
Sbjct: 109 tgagaatcttgatgatgctgca 130
>41395_ptc-MIR172a:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 98 gaatcttgatgatgctgcagctgcaa 123
||||||||||||||||||| ||||||
Sbjct: 30 gaatcttgatgatgctgcacctgcaa 5
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 tgagaatcttgatgatgctgca 116
||||||||||||||||||||||
Sbjct: 98 tgagaatcttgatgatgctgca 119
>41233_csi-MIR172a:mirbase
Length = 162
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 tgagaatcttgatgatgctgca 116
||||||||||||||||||||||
Sbjct: 113 tgagaatcttgatgatgctgca 134
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 tgagaatcttgatgatgctgca 116
||||||||||||||||||||||
Sbjct: 147 tgagaatcttgatgatgctgca 168
>40463_gma-MIR172f:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 tgagaatcttgatgatgctgca 116
||||||||||||||||||||||
Sbjct: 107 tgagaatcttgatgatgctgca 128
>40459_gma-MIR172b:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 tgagaatcttgatgatgctgca 116
||||||||||||||||||||||
Sbjct: 112 tgagaatcttgatgatgctgca 133
>40458_gma-MIR172a:mirbase
Length = 159
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 tgagaatcttgatgatgctgca 116
||||||||||||||||||||||
Sbjct: 118 tgagaatcttgatgatgctgca 139
>41542_sly-MIR172a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 gagaatcttgatgatgctgca 116
|||||||||||||||||||||
Sbjct: 85 gagaatcttgatgatgctgca 105
>41991_osa-MIR172b:mirbase
Length = 238
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 89 tatgtatgagaatcttgatgatgctgca 116
||||| || |||||||||||||||||||
Sbjct: 200 tatgtgtgggaatcttgatgatgctgca 227
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 89 tatgtatgagaatcttgatgatgctgca 116
||||| || |||||||||||||||||||
Sbjct: 196 tatgtgtgggaatcttgatgatgctgca 223
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 93 tatgagaatcttgatgatgctgca 116
|||| |||||||||||||||||||
Sbjct: 149 tatgggaatcttgatgatgctgca 172
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 20 gcatcatcaagattcacaaa 39
||||||||||||||||||||
Sbjct: 26 gcatcatcaagattcacaaa 45
