miRNEST 2.0, an integrative microRNA resource :: BLAST
>40164_ath-MIR841:mirbase
Length = 212
Score = 281 bits (142), Expect = 7e-77
Identities = 142/142 (100%)
Strand = Plus / Minus
Query: 1 gagttgcatgtgaatacgacccactagaaattgaaataaacaaagaaatttcattttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 gagttgcatgtgaatacgacccactagaaattgaaataaacaaagaaatttcattttttg 118
Query: 61 tagtataatttgataaaattttatactgatattgtttctttgtttctttcagtttcaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 tagtataatttgataaaattttatactgatattgtttctttgtttctttcagtttcaagt 58
Query: 121 ggctcgtattcacaagcaactt 142
||||||||||||||||||||||
Sbjct: 57 ggctcgtattcacaagcaactt 36
Score = 54.0 bits (27), Expect = 3e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 2 agttgcatgtgaatacgacccactagaaattgaaataaacaaagaaa 48
|||||| ||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 37 agttgcttgtgaatacgagccacttgaaactgaaagaaacaaagaaa 83
Score = 54.0 bits (27), Expect = 3e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 95 tttctttgtttctttcagtttcaagtggctcgtattcacaagcaact 141
||||||||||| ||||| |||| ||||| ||||||||||| ||||||
Sbjct: 130 tttctttgtttatttcaatttctagtgggtcgtattcacatgcaact 176
>40165_ath-MIR841b:mirbase
Length = 495
Score = 250 bits (126), Expect = 2e-67
Identities = 138/142 (97%)
Strand = Plus / Minus
Query: 1 gagttgcatgtgaatacgacccactagaaattgaaataaacaaagaaatttcattttttg 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gagttgtatgtgaatacgacccactagaaattgaaataaacaaagaaatttcattttttg 259
Query: 61 tagtataatttgataaaattttatactgatattgtttctttgtttctttcagtttcaagt 120
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 258 tagtctaatttgatgaaattttatactgatattgtttctttgtttctttcagtttccagt 199
Query: 121 ggctcgtattcacaagcaactt 142
||||||||||||||||||||||
Sbjct: 198 ggctcgtattcacaagcaactt 177
Score = 54.0 bits (27), Expect = 3e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 2 agttgcatgtgaatacgacccactagaaattgaaataaacaaagaaa 48
|||||| ||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 178 agttgcttgtgaatacgagccactggaaactgaaagaaacaaagaaa 224
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 95 tttctttgtttctttcagtttcaagtggctcgtattcaca 134
||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 271 tttctttgtttatttcaatttctagtgggtcgtattcaca 310
>39923_aly-MIR841:mirbase
Length = 214
Score = 115 bits (58), Expect = 9e-27
Identities = 123/144 (85%), Gaps = 3/144 (2%)
Strand = Plus / Minus
Query: 1 gagttgcatgtgaatacgacccactagaaattgaaataaacaaagaaatttcattt---t 57
||||||||||||||||||||||| | ||| |||| |||||||||||||||||| | |
Sbjct: 180 gagttgcatgtgaatacgacccatcaaaaactgaagtaaacaaagaaatttcatgtctct 121
Query: 58 ttgtagtataatttgataaaattttatactgatattgtttctttgtttctttcagtttca 117
||||| | |||||| || |||||| | ||||||| ||||||||||||| ||| ||||||
Sbjct: 120 ttgtactctaattttatgaaatttcacactgatactgtttctttgtttattttagtttcc 61
Query: 118 agtggctcgtattcacaagcaact 141
||||| ||||||||||| ||||||
Sbjct: 60 agtgggtcgtattcacaggcaact 37
Score = 63.9 bits (32), Expect = 3e-11
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 1 gagttgcatgtgaatacgacccactagaaattgaaataaacaaagaaa 48
||||||| ||||||||||||||||| |||| | |||||||||||||||
Sbjct: 36 gagttgcctgtgaatacgacccactggaaactaaaataaacaaagaaa 83
